RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PLSCR4Q9NRQ2 329 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 RPRMQ9NS64 109 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 TMEM242Q9NWH2 141 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 PUS1Q9Y606 427 aaKnown RBP eCLIP6.51□□□□□ -1.37
CXCR4-201ENST00000241393 R4GN57 208 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 COL6A3P12111 3177 aa6.51□□□□□ -1.37
CXCR4-201ENST00000241393 DOCK7Q96N67 2140 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 TRAV39A0A0B4J263 110 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 MED19A0JLT2 244 aaPredicted RBP6.5□□□□□ -1.37
CXCR4-201ENST00000241393 H3BP45 60 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 RAB29O14966 203 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 TGOLN2O43493 480 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 SOX15O60248 233 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 CLDN14O95500 239 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 IGHV2-5P01817 119 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 HBZP02008 142 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 MBP02144 154 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 METTL15P1P0C7V9 234 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 BCL2P10415 239 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 IAPPP10997 89 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 CFHR2P36980 270 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 OR3A1P47881 315 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 HTD2P86397 168 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 PMP22Q01453 160 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 ARL16Q0P5N6 197 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 HAGHQ16775 308 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 TMEM41BQ5BJD5 291 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 WDR82Q6UXN9 313 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 HEPN1Q6WQI6 88 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 HAPLN4Q86UW8 402 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF429Q86V71 674 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 GCNT2Q8N0V5 402 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 ZFP82Q8N141 532 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 FAM24BQ8N5W8 94 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 CYB561D1Q8N8Q1 229 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 FDCSPQ8NFU4 85 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 OR1L1Q8NH94 360 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 TAF15Q92804 592 aaKnown RBP eCLIP6.5□□□□□ -1.37
CXCR4-201ENST00000241393 ISOC2Q96AB3 205 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 RAB39BQ96DA2 213 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 HSD17B10Q99714 261 aaKnown RBP6.5□□□□□ -1.37
CXCR4-201ENST00000241393 C20orf24Q9BUV8 137 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.5□□□□□ -1.37
CXCR4-201ENST00000241393 SLC25A10Q9UBX3 287 aaPredicted RBP6.5□□□□□ -1.37
CXCR4-201ENST00000241393 TINAGQ9UJW2 476 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 RFNGQ9Y644 331 aa6.5□□□□□ -1.37
CXCR4-201ENST00000241393 A0A1B0GV50 99 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 A0A1W2PPE2 198 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 LRRC30A6NM36 301 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 H0YL77 283 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 TIMM8AO60220 97 aaPredicted RBP6.49□□□□□ -1.37
CXCR4-201ENST00000241393 PTBP3O95758 552 aaKnown RBP6.49□□□□□ -1.37
CXCR4-201ENST00000241393 CECR9P0C854 216 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 GCH1P30793 250 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 PROK1P58294 105 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 SNRPEP62304 92 aaKnown RBP6.49□□□□□ -1.37
CXCR4-201ENST00000241393 DLK1P80370 383 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 SLC38A11Q08AI6 406 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 IZUMO4Q1ZYL8 232 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 SPANXN5Q5MJ07 72 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 VASH2Q86V25 355 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 CNEP1R1Q8N9A8 125 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 C9orf106Q8NAJ2 232 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 OR13D1Q8NGV5 346 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 PRSS3P2Q8NHM4 247 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 COQ2Q96H96 371 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 OR4C12Q96R67 309 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 RSG1Q9BU20 258 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 TMEM147Q9BVK8 224 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 OR2D2Q9H210 308 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 RBKSQ9H477 322 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 NCOR1P1Q9H4R4 102 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 ASCL3Q9NQ33 180 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 VAX2Q9UIW0 290 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 hCG_1809904A0A1W2PP81 198 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 A0A1W2PR64 198 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 A0A1W2PRV1 198 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 OR5H1A6NKK0 313 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 SPINT2O43291 252 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 CEACAM4O75871 244 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 CLDN1O95832 211 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 ARG1P05089 322 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 S100A9P06702 114 aaKnown RBP6.49□□□□□ -1.37
CXCR4-201ENST00000241393 DAOP14920 347 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 GABRA2P47869 451 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 GLIPR1P48060 266 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 CCL11P51671 97 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 VWC2Q2TAL6 325 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 AARDQ4LEZ3 155 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 ADAM5Q6NVV9 412 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 RBMS3Q6XE24 437 aaKnown RBP6.49□□□□□ -1.37
CXCR4-201ENST00000241393 AGMATQ9BSE5 352 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 PRDM13Q9H4Q3 707 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 GNG13Q9P2W3 67 aa6.49□□□□□ -1.37
CXCR4-201ENST00000241393 A0A087X0M5 115 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 IGHV2OR16-5A0A0B4J2B6 119 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 A0A1B0GX30 115 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 ODAMA1E959 279 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 MAP1LC3B2A6NCE7 125 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms