RNA–Protein interactions for RNA: ENST00000229379.2

COX6A1-201, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6A1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-201ENST00000229379 SMAD5-AS1Q9Y6J3 95 aa12.16□□□□□ -0.46
COX6A1-201ENST00000229379 C13orf42A0A1B0GVH6 325 aa12.15□□□□□ -0.46
COX6A1-201ENST00000229379 IZUMO1RA6ND01 250 aa12.15□□□□□ -0.46
COX6A1-201ENST00000229379 DIRAS3O95661 229 aa12.15□□□□□ -0.46
COX6A1-201ENST00000229379 UBE2KP61086 200 aa12.15□□□□□ -0.46
COX6A1-201ENST00000229379 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
COX6A1-201ENST00000229379 Q8N1Y9 231 aa12.15□□□□□ -0.46
COX6A1-201ENST00000229379 PHB2Q99623 299 aa12.15□□□□□ -0.46
COX6A1-201ENST00000229379 SPATA2Q9UM82 520 aa12.15□□□□□ -0.46
COX6A1-201ENST00000229379 RBMX2Q9Y388 322 aaKnown RBP12.15□□□□□ -0.46
COX6A1-201ENST00000229379 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 TNFSF12O43508 249 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 CD36P16671 472 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 GNG2P59768 71 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 ZNF343Q6P1L6 599 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 KCTD9Q7L273 389 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 TPRA1Q86W33 373 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 TEX45Q8NA69 505 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 FCGR1BQ92637 280 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 DCUN1D5Q9BTE7 237 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 AKIP1Q9NQ31 210 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 TAS2R8Q9NYW2 309 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 ANXA10Q9UJ72 324 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 S4R3C0 116 aa12.14□□□□□ -0.47
COX6A1-201ENST00000229379 IGLV1-51P01701 117 aa12.13□□□□□ -0.47
COX6A1-201ENST00000229379 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
COX6A1-201ENST00000229379 RRASP10301 218 aa12.13□□□□□ -0.47
COX6A1-201ENST00000229379 AADACP22760 399 aa12.13□□□□□ -0.47
COX6A1-201ENST00000229379 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
COX6A1-201ENST00000229379 CNIH2Q6PI25 160 aa12.13□□□□□ -0.47
COX6A1-201ENST00000229379 ADAMTSL5Q6ZMM2 481 aa12.13□□□□□ -0.47
COX6A1-201ENST00000229379 OR4C12Q96R67 309 aa12.13□□□□□ -0.47
COX6A1-201ENST00000229379 YTHDF1Q9BYJ9 559 aaKnown RBP12.13□□□□□ -0.47
COX6A1-201ENST00000229379 RANGRFQ9HD47 186 aaPredicted RBP12.13□□□□□ -0.47
COX6A1-201ENST00000229379 CCL28Q9NRJ3 127 aa12.13□□□□□ -0.47
COX6A1-201ENST00000229379 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
COX6A1-201ENST00000229379 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 H3BUA1 57 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 IGHV3-23P01764 117 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
COX6A1-201ENST00000229379 CSN3P07498 182 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
COX6A1-201ENST00000229379 OR9G9P0C7N8 305 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 CD40LGP29965 261 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 LSM3P62310 102 aaKnown RBP12.12□□□□□ -0.47
COX6A1-201ENST00000229379 DCTN2Q13561 401 aaKnown RBP12.12□□□□□ -0.47
COX6A1-201ENST00000229379 CDK10Q15131 360 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 OR6Q1Q8NGQ2 317 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 SECTM1Q8WVN6 248 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 TCTEX1D2Q8WW35 142 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 SNAPC3Q92966 411 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 ADTRPQ96IZ2 230 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 DCSTAMPQ9H295 470 aa12.12□□□□□ -0.47
COX6A1-201ENST00000229379 PEF1Q9UBV8 284 aaKnown RBP12.12□□□□□ -0.47
COX6A1-201ENST00000229379 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 BMPR1BO00238 502 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 OR2J3O76001 311 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 FCGR2CP31995 323 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 RANBP1P43487 201 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 RHOGP84095 191 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 CBX3Q13185 183 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 MFSD4AQ8N468 514 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 BEST4Q8NFU0 473 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 OR9G4Q8NGQ1 327 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 OSR1Q8TAX0 266 aaPredicted RBP12.11□□□□□ -0.47
COX6A1-201ENST00000229379 RCHY1Q96PM5 261 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 Q9H521 79 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 DMRT1Q9Y5R6 373 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 TENM2Q9NT68 2774 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 HYDINQ4G0P3 5121 aa12.11□□□□□ -0.47
COX6A1-201ENST00000229379 TRBV9A0A0B4J1U6 114 aa12.1□□□□□ -0.47
COX6A1-201ENST00000229379 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
COX6A1-201ENST00000229379 A0A0G2JLM5 398 aa12.1□□□□□ -0.47
COX6A1-201ENST00000229379 MPPED1O15442 326 aa12.1□□□□□ -0.47
COX6A1-201ENST00000229379 REG1AP05451 166 aa12.1□□□□□ -0.47
COX6A1-201ENST00000229379 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
COX6A1-201ENST00000229379 AREGP15514 252 aa12.1□□□□□ -0.47
COX6A1-201ENST00000229379 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
COX6A1-201ENST00000229379 PUSL1Q8N0Z8 303 aaKnown RBP12.1□□□□□ -0.47
COX6A1-201ENST00000229379 AUNIPQ9H7T9 357 aa12.1□□□□□ -0.47
COX6A1-201ENST00000229379 ZP3P21754 424 aa12.09□□□□□ -0.47
COX6A1-201ENST00000229379 FXYD4P59646 89 aa12.09□□□□□ -0.47
COX6A1-201ENST00000229379 HOGA1Q86XE5 327 aa12.09□□□□□ -0.47
COX6A1-201ENST00000229379 ANKRD13BQ86YJ7 626 aa12.09□□□□□ -0.47
COX6A1-201ENST00000229379 OR13F1Q8NGS4 319 aa12.09□□□□□ -0.47
COX6A1-201ENST00000229379 FYTTD1Q96QD9 318 aaKnown RBP12.09□□□□□ -0.47
COX6A1-201ENST00000229379 THAP7Q9BT49 309 aaPredicted RBP12.09□□□□□ -0.47
COX6A1-201ENST00000229379 SULT1C2O00338 296 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 KBTBD11O94819 623 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 NDUFB8O95169 186 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 BRI3O95415 125 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 CTXN2P0C2S0 81 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 RPA2P15927 270 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 RPS19P39019 145 aaKnown RBP12.08□□□□□ -0.48
COX6A1-201ENST00000229379 ARL6IP1Q15041 203 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 KCTD21Q4G0X4 260 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 TTC9CQ8N5M4 171 aa12.08□□□□□ -0.48
COX6A1-201ENST00000229379 YIPF6Q96EC8 236 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms