RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 TMEM30CPA0ZSE6 113 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 K7EN84 100 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 RBMXL2O75526 392 aaKnown RBP11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 NXPH2O95156 264 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 CXorf1O96002 111 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 MT-CO3P00414 261 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 ZNF718Q3SXZ3 478 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 APH1AQ96BI3 265 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 NBEAQ8NFP9 2946 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 F2Z2F3 143 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 RRHO14718 337 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 CLDN18P56856 261 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 PSG7Q13046 419 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 HLA-DRB5Q30154 266 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 AARDQ4LEZ3 155 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 KRTCAP3Q53RY4 240 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 TDHQ8IZJ6 230 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 Q8N976 141 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 WDR31Q8NA23 367 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 R4GN57 208 aa11.66□□□□□ -0.54
SCNN1A-201ENST00000228916 PSPNO60542 156 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 CFIP05156 583 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 HNF1AP20823 631 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 SPATA46Q5T0L3 261 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 TREML4Q6UXN2 200 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 BAGE3Q86Y29 109 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 BAGE2Q86Y30 109 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 OR2M7Q8NG81 312 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 TMEM204Q9BSN7 226 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 RNF114Q9Y508 228 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 LINC00473A8K010 186 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 CYB561P49447 251 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 OR5I1Q13606 314 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 SAMD10Q9BYL1 202 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 ZNF703Q9H7S9 590 aaPredicted RBP11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 FBXL7Q9UJT9 491 aa11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 YTHDF2Q9Y5A9 579 aaKnown RBP11.65□□□□□ -0.54
SCNN1A-201ENST00000228916 SLC17A3O00476 420 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 FCN1O00602 326 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 HAND1O96004 215 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 HBZP02008 142 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 CTRLP40313 264 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 TMPRSS7Q7RTY8 843 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 MCEMP1Q8IX19 187 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 C11orf52Q96A22 123 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 LRFN3Q9BTN0 628 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 GGTLC1Q9BX51 225 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 ZFP30Q9Y2G7 519 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 LY96Q9Y6Y9 160 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 SPENQ96T58 3664 aaKnown RBP11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 TRBV9A0A0B4J1U6 114 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 OOEPA6NGQ2 149 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 PATE3B3GLJ2 98 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 C9JCJ5 164 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 CDIPTO14735 213 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 IGHEP01854 428 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 BATFQ16520 125 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 PMS2CLQ68D20 193 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 MGST2Q99735 147 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 BOKQ9UMX3 212 aaPredicted RBP11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 PRSS46E5RG02 174 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 GPX1P07203 203 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 CEBPDP49716 269 aaPredicted RBP11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 TMPRSS3P57727 454 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 RPL31P62899 125 aaKnown RBP11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 ZNF766Q5HY98 468 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 SLC35E4Q6ICL7 350 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 RNF2Q99496 336 aa11.64□□□□□ -0.55
SCNN1A-201ENST00000228916 OR9G9P0C7N8 305 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 FRMD6-AS1P0C7T7 363 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 IER3P46695 156 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 LINC00205P59089 165 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 TGFBR3Q03167 851 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 GNB1LQ9BYB4 327 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 SNURFLB1AK76 121 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 OR1C1Q15619 314 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 PDLIM3Q53GG5 364 aaPredicted RBP11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 MIC13Q5XKP0 118 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 C1orf174Q8IYL3 243 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 SIGLECL1Q8N7X8 197 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 NINJ1Q92982 152 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 HSD17B10Q99714 261 aaKnown RBP11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 SFXN3Q9BWM7 321 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 OPN3Q9H1Y3 402 aaPredicted RBP11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 HES4Q9HCC6 221 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 SLC45A2Q9UMX9 530 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 SIT1Q9Y3P8 196 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 FAM186AA6NE01 2351 aa11.63□□□□□ -0.55
SCNN1A-201ENST00000228916 DNAJC13O75165 2243 aa11.62□□□□□ -0.55
SCNN1A-201ENST00000228916 TFPI2P48307 235 aa11.62□□□□□ -0.55
SCNN1A-201ENST00000228916 RAB7AP51149 207 aa11.62□□□□□ -0.55
SCNN1A-201ENST00000228916 ZXDAP98168 799 aa11.62□□□□□ -0.55
SCNN1A-201ENST00000228916 TRA2AQ13595 282 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCNN1A-201ENST00000228916 MMD2Q8IY49 270 aa11.62□□□□□ -0.55
SCNN1A-201ENST00000228916 HES7Q9BYE0 225 aa11.62□□□□□ -0.55
SCNN1A-201ENST00000228916 MS4A5Q9H3V2 200 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms