RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 H3BUA1 57 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 MPPED1O15442 326 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 TNFSF12O43508 249 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 AADACP22760 399 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 FCGR2CP31995 323 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 DCTN2Q13561 401 aaKnown RBP10.95□□□□□ -0.66
GPN3-201ENST00000228827 C10orf55Q5SWW7 151 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 ZNF429Q86V71 674 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 VKORC1L1Q8N0U8 176 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 SECTM1Q8WVN6 248 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 SRSF12Q8WXF0 261 aaKnown RBP10.95□□□□□ -0.66
GPN3-201ENST00000228827 TMEM68Q96MH6 324 aa10.95□□□□□ -0.66
GPN3-201ENST00000228827 LSM4Q9Y4Z0 139 aaKnown RBP10.95□□□□□ -0.66
GPN3-201ENST00000228827 A0A0G2JLM5 398 aa10.94□□□□□ -0.66
GPN3-201ENST00000228827 CDK10Q15131 360 aa10.94□□□□□ -0.66
GPN3-201ENST00000228827 VAX1Q5SQQ9 334 aa10.94□□□□□ -0.66
GPN3-201ENST00000228827 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
GPN3-201ENST00000228827 OVCH2Q7RTZ1 564 aa10.94□□□□□ -0.66
GPN3-201ENST00000228827 MFSD4AQ8N468 514 aa10.94□□□□□ -0.66
GPN3-201ENST00000228827 SNAPC3Q92966 411 aa10.94□□□□□ -0.66
GPN3-201ENST00000228827 TINAGL1Q9GZM7 467 aaPredicted RBP10.94□□□□□ -0.66
GPN3-201ENST00000228827 CCL28Q9NRJ3 127 aa10.94□□□□□ -0.66
GPN3-201ENST00000228827 ACTL6BO94805 426 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 PRH1P02810 166 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 OR9G9P0C7N8 305 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 FXYD4P59646 89 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 EIF4EBP1Q13541 118 aaPredicted RBP10.93□□□□□ -0.66
GPN3-201ENST00000228827 UBE2NLQ5JXB2 153 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 ACSM6Q6P461 480 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 HAPLN4Q86UW8 402 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 CROCCP3Q8IVE0 287 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 SAMD12Q8N8I0 201 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 OR13F1Q8NGS4 319 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 OR4S2Q8NH73 311 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 S100A16Q96FQ6 103 aaKnown RBP10.93□□□□□ -0.66
GPN3-201ENST00000228827 HSD17B10Q99714 261 aaKnown RBP10.93□□□□□ -0.66
GPN3-201ENST00000228827 RANGRFQ9HD47 186 aaPredicted RBP10.93□□□□□ -0.66
GPN3-201ENST00000228827 IFT46Q9NQC8 304 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 XRCC3O43542 346 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 CREBL2O60519 120 aaPredicted RBP10.93□□□□□ -0.66
GPN3-201ENST00000228827 TMEM127O75204 238 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 RBMXL2O75526 392 aaKnown RBP10.93□□□□□ -0.66
GPN3-201ENST00000228827 PPYP01298 95 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 CBX5P45973 191 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 DYRK1AQ13627 763 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 ZNF66Q6ZN08 573 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 SSX9Q7RTT3 188 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 MMD2Q8IY49 270 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 ADAD2Q8NCV1 583 aaKnown RBP10.93□□□□□ -0.66
GPN3-201ENST00000228827 OR4C12Q96R67 309 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 RSRP1Q9BUV0 290 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 SLC5A7Q9GZV3 580 aa10.93□□□□□ -0.66
GPN3-201ENST00000228827 HMX3A6NHT5 357 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 TRBV12-3P01733 135 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 SPNP16150 400 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 NCS1P62166 190 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 TMEM69Q5SWH9 247 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 TMEM17Q86X19 198 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 OR5AP2Q8NGF4 316 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 ASCL2Q99929 193 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 ELOVL1Q9BW60 279 aa10.92□□□□□ -0.66
GPN3-201ENST00000228827 KBTBD11O94819 623 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 OR2A4O95047 310 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 ZP3P21754 424 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 TAS2R20P59543 309 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 C19orf35Q6ZS72 473 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 OR6Q1Q8NGQ2 317 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 VSTM2AQ8TAG5 236 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 USMG5Q96IX5 58 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 OR2A7Q96R45 310 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 SPIN2AQ99865 258 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 SPIN2BQ9BPZ2 258 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 FUNDC2Q9BWH2 189 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 EHFQ9NZC4 300 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 COMMD3Q9UBI1 195 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 PEF1Q9UBV8 284 aaKnown RBP10.91□□□□□ -0.66
GPN3-201ENST00000228827 ADAM30Q9UKF2 790 aa10.91□□□□□ -0.66
GPN3-201ENST00000228827 SULT1C2O00338 296 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 BRI3O95415 125 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 GP9P14770 177 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 KIR2DS2P43631 304 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 SYNJ2BPP57105 145 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 VBP1P61758 197 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 RHOGP84095 191 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 ZNF45Q02386 682 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 ZNF343Q6P1L6 599 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 ZNF818PQ6ZRF7 136 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 SPAG16Q8N0X2 631 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 PUSL1Q8N0Z8 303 aaKnown RBP10.9□□□□□ -0.66
GPN3-201ENST00000228827 GIMAP1Q8WWP7 306 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 SLC25A46Q96AG3 418 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 FYTTD1Q96QD9 318 aaKnown RBP10.9□□□□□ -0.66
GPN3-201ENST00000228827 AKIP1Q9NQ31 210 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 SMAD5-AS1Q9Y6J3 95 aa10.9□□□□□ -0.66
GPN3-201ENST00000228827 TRIM64CA6NLI5 447 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 TEX22C9J3V5 150 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 PMP2P02689 132 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 EIF4EP06730 217 aaKnown RBP10.89□□□□□ -0.67
GPN3-201ENST00000228827 MYOD1P15172 320 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms