RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 GREM1O60565 184 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 LYZL6O75951 148 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 IGKV3-11P04433 115 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 CKS2P33552 79 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 PSG4Q00888 419 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 LAIR2Q6ISS4 152 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 DEFB108BQ8NET1 73 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 OR8A1Q8NGG7 326 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 CA5BP1Q8WTZ4 195 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 ZDHHC16Q969W1 377 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 RARRES2Q99969 163 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 NPCDR1Q9BY65 106 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 TTTY12Q9BZ98 90 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 MS4A7Q9GZW8 240 aaPredicted RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 IL36BQ9NZH7 164 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 HSPB7Q9UBY9 170 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 CHTOPQ9Y3Y2 248 aaKnown RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 ADAMTS9Q9P2N4 1935 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 F5H697 171 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 LINC00271P0C7V0 271 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 ZNF708P17019 499 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 MPV17P39210 176 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 TCL1AP56279 114 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 DCAF10Q5QP82 559 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 C1QL3Q5VWW1 255 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 DGAT2L7PQ6IED9 249 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 RTN4RL2Q86UN3 420 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 MDP1Q86V88 176 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 FGFRL1Q8N441 504 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 CLDND2Q8NHS1 167 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 OSR1Q8TAX0 266 aaPredicted RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 GNB1LQ9BYB4 327 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 HES7Q9BYE0 225 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 PARD6GQ9BYG4 376 aaPredicted RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 DOK5Q9P104 306 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 FOXD3Q9UJU5 478 aaPredicted RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 SHISA8B8ZZ34 492 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 NPIPB7O75200 414 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 NUDT3O95989 172 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 IGHV4-34P06331 123 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 SMIM13P0DJ93 91 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 ASPHD2Q6ICH7 369 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 FAM166AQ6J272 317 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 MRPL54Q6P161 138 aaKnown RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 FAM214BQ7L5A3 538 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 PCGF1Q9BSM1 259 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 FOXQ1Q9C009 403 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 ARRDC1-AS1Q9H2J1 176 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 CLDN16Q9Y5I7 305 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 A0A1W2PQF6 199 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 C16orf97H3BN30 126 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 M0R3E3 92 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 CCL3P10147 92 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 COL9A1P20849 921 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 CXorf67Q86X51 503 aaPredicted RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 OR11H4Q8NGC9 324 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 OR10S1Q8NGN2 331 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 DPF1Q92782 380 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 GPR146Q96CH1 333 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 A0A0G2JK05 382 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 A0A1W2PQM1 296 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 RNF222A6NCQ9 220 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 RBFOX2O43251 390 aaKnown RBP eCLIP3.78□□□□□ -1.8
CHD9-201ENST00000219084 FGF16O43320 207 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 HYAL3O43820 417 aaPredicted RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 ZNF883P0CG24 379 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 IL11P20809 199 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 C1orf185Q5T7R7 199 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 SPANXN1Q5VSR9 72 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 ZNF880Q6PDB4 577 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 MOGAT3Q86VF5 341 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 ZNF441Q8N8Z8 693 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 OR52E5Q8NH55 327 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 ZPLD1Q8TCW7 415 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 WDYHV1Q96HA8 205 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 C18orf12Q96KH6 178 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 TMEM140Q9NV12 185 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 DYSFO75923 2080 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 TMEM11P17152 192 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 NUBP1P53384 320 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 SPINK14Q6IE38 97 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 CIARTQ8N365 385 aaPredicted RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 CHCHD1Q96BP2 118 aaKnown RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 C1QTNF5Q9BXJ0 243 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 IDI2-AS1Q9NZ38 188 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 H7C1H1 209 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 MAGEA5P43359 124 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 AESQ08117 197 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 MGAT2Q10469 447 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 LAMTOR1Q6IAA8 161 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 LINC00469Q8N7U9 141 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 OR1N2Q8NGR9 330 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 AGMATQ9BSE5 352 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 GSN-AS1Q9NRJ2 163 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 INTS1Q8N201 2190 aaKnown RBP3.78□□□□□ -1.8
CHD9-201ENST00000219084 EML5Q05BV3 1969 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 TRBV6-7A0A0A0MS04 114 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 TRAV34A0A0B4J273 112 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 DPRXA6NFQ7 191 aa3.78□□□□□ -1.8
CHD9-201ENST00000219084 HRKO00198 91 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms