RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ZDHHC16Q969W1 377 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 OR4C12Q96R67 309 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 HIPK2Q9H2X6 1198 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 USF3Q68DE3 2245 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 IGHV1-8P0DP01 117 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 IL3RAP26951 378 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 RUNX1Q01196 453 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 LRRC75BQ2VPJ9 315 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 OR4A47Q6IF82 309 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 DTX2Q86UW9 622 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 LFNGQ8NES3 379 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 OR8B3Q8NGG8 313 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 OR8B2Q96RD0 313 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 PSMG3Q9BT73 122 aaPredicted RBP14.24□□□□□ -0.13
VRK1-201ENST00000216639 YLPM1P49750 1951 aaKnown RBP14.23□□□□□ -0.13
VRK1-201ENST00000216639 C1QL1O75973 258 aa14.23□□□□□ -0.13
VRK1-201ENST00000216639 APOC3P02656 99 aa14.23□□□□□ -0.13
VRK1-201ENST00000216639 SOD3P08294 240 aa14.23□□□□□ -0.13
VRK1-201ENST00000216639 AVPI1Q5T686 147 aa14.23□□□□□ -0.13
VRK1-201ENST00000216639 OR13D1Q8NGV5 346 aa14.23□□□□□ -0.13
VRK1-201ENST00000216639 NEIL1Q96FI4 390 aaPredicted RBP14.23□□□□□ -0.13
VRK1-201ENST00000216639 NCOR2Q9Y618 2525 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 C15orf61A6NNL5 157 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 AGPAT2O15120 278 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 PPIHO43447 177 aaKnown RBP14.22□□□□□ -0.13
VRK1-201ENST00000216639 FHITP49789 147 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 AKR1C1Q04828 323 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 SPINK9Q5DT21 86 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 ZNF841Q6ZN19 808 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 TNFRSF14Q92956 283 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 TMEM147Q9BVK8 224 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 WDR61Q9GZS3 305 aaKnown RBP14.22□□□□□ -0.13
VRK1-201ENST00000216639 TMEM133Q9H2Q1 129 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 NARFLQ9H6Q4 476 aa14.22□□□□□ -0.13
VRK1-201ENST00000216639 FOXA2Q9Y261 457 aaPredicted RBP14.22□□□□□ -0.13
VRK1-201ENST00000216639 hCG_1809904A0A1W2PP81 198 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 A0A1W2PPE2 198 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 A0A1W2PR64 198 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 A0A1W2PRV1 198 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 RNASEK-C17orf49H0YIS7 233 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 DVL1P1P54792 670 aaPredicted RBP14.21□□□□□ -0.13
VRK1-201ENST00000216639 RAB2AP61019 212 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 GNB2P62879 340 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 TLE4Q04727 773 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 ABHD12Q8N2K0 398 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 OSR1Q8TAX0 266 aaPredicted RBP14.21□□□□□ -0.13
VRK1-201ENST00000216639 MRPL20Q9BYC9 149 aaKnown RBP14.21□□□□□ -0.13
VRK1-201ENST00000216639 HEYLQ9NQ87 328 aaPredicted RBP14.21□□□□□ -0.13
VRK1-201ENST00000216639 UQCC1Q9NVA1 299 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 ZNRD1Q9P1U0 126 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 PRNDQ9UKY0 176 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 FBXO7Q9Y3I1 522 aa14.21□□□□□ -0.13
VRK1-201ENST00000216639 ROS1P08922 2347 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 BTBD17A6NE02 478 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 H7C2Y5 167 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 RBP4P02753 201 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 SNCAP37840 140 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 HOXA1P49639 335 aaPredicted RBP14.21□□□□□ -0.14
VRK1-201ENST00000216639 SERF2P84101 59 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 PBDC1Q9BVG4 233 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 CHODLQ9H9P2 273 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 ENY2Q9NPA8 101 aa14.21□□□□□ -0.14
VRK1-201ENST00000216639 PKDREJQ9NTG1 2253 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 TRAV3A0A0B4J244 114 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 UBE2L5PA0A1B0GUS4 154 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 PMS2P5A8MQ11 134 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 IFNA10P01566 189 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 H2AFB1P0C5Y9 115 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 ZNF137PP52743 207 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 HSPE1P61604 102 aaKnown RBP14.2□□□□□ -0.14
VRK1-201ENST00000216639 SRSF3P84103 164 aaKnown RBP14.2□□□□□ -0.14
VRK1-201ENST00000216639 PEA15Q15121 130 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 PUSL1Q8N0Z8 303 aaKnown RBP14.2□□□□□ -0.14
VRK1-201ENST00000216639 OR5AN1Q8NGI8 311 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 TAF15Q92804 592 aaKnown RBP eCLIP14.2□□□□□ -0.14
VRK1-201ENST00000216639 TMEM231Q9H6L2 316 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 TMEM14BQ9NUH8 114 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 TCF19Q9Y242 345 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 TIMM9Q9Y5J7 89 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 RFNGQ9Y644 331 aa14.2□□□□□ -0.14
VRK1-201ENST00000216639 PPIAL4CA0A0B4J2A2 164 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 F8W036 122 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 SCO1O75880 301 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 ARG1P05089 322 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 PPIAL4GP0DN37 164 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 PRRX1P54821 245 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 DEFA5Q01523 94 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 WDR25Q64LD2 544 aaPredicted RBP14.19□□□□□ -0.14
VRK1-201ENST00000216639 PDPNQ86YL7 162 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 C8orf46Q8TAG6 207 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 PCGF1Q9BSM1 259 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 RSG1Q9BU20 258 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 FKBP11Q9NYL4 201 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 FAM96BQ9Y3D0 163 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 ATRXP46100 2492 aa14.19□□□□□ -0.14
VRK1-201ENST00000216639 DIDO1Q9BTC0 2240 aaKnown RBP14.18□□□□□ -0.14
VRK1-201ENST00000216639 C15orf62A8K5M9 175 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 H0YJW9 148 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 UPK2O00526 184 aa14.18□□□□□ -0.14
VRK1-201ENST00000216639 HBE1P02100 147 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms