RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GCM1Q9NP62 436 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
EFNB1-201ENST00000204961 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 CDX4O14627 284 aaPredicted RBP12.6□□□□□ -0.39
EFNB1-201ENST00000204961 CD59P13987 128 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 REG1BP48304 166 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
EFNB1-201ENST00000204961 LINC00470Q9BZP3 86 aa12.6□□□□□ -0.39
EFNB1-201ENST00000204961 MALRD1Q5VYJ5 2156 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 CECR9P0C854 216 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 BRWD1-AS2P59051 145 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 PMS2P11Q13670 270 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 MLANAQ16655 118 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 PDLIM3Q53GG5 364 aaPredicted RBP12.59□□□□□ -0.39
EFNB1-201ENST00000204961 ZNF114Q8NC26 417 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 R3HDM4Q96D70 268 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 ARHGAP32A7KAX9 2087 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 SPTBN4Q9H254 2564 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 LRRC30A6NM36 301 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 IFNA1P01562 189 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 RPL23P62829 140 aaKnown RBP12.59□□□□□ -0.39
EFNB1-201ENST00000204961 MSMO1Q15800 293 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 OR4A16Q8NH70 328 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 CATR1Q13166 79 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 SPATA31B1PQ5VZV4 182 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 FER1L6-AS2Q96M78 137 aa12.59□□□□□ -0.39
EFNB1-201ENST00000204961 RBM14Q96PK6 669 aaKnown RBP12.59□□□□□ -0.39
EFNB1-201ENST00000204961 SLC17A3O00476 420 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 SCGB1D1O95968 90 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 CYB5R3P00387 301 aaPredicted RBP12.58□□□□□ -0.4
EFNB1-201ENST00000204961 GYPAP02724 150 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 TCL1AP56279 114 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 GNB2P62879 340 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 MRGPRGQ86SM5 289 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 SGK494Q96LW2 274 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 AMBPP02760 352 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 GZMBP10144 247 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 TDGF1P13385 188 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 DLX1P56177 255 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 SLC35E3Q7Z769 313 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 KDF1Q8NAX2 398 aaPredicted RBP12.58□□□□□ -0.4
EFNB1-201ENST00000204961 OR10A7Q8NGE5 316 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 DSCAMO60469 2012 aa12.58□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A10PA6NDY2 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A18PA6NE21 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A16PA6NEW6 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A20PA6NIJ5 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A8PA6NJQ4 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A7PA6NKC0 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A22PA8MWA6 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A12PA8MX19 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A5PA8MXJ8 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A23PA8MXZ1 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FRMD6-AS1P0C7T7 363 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A15PP0C7V4 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A13PP0C7W8 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A14PP0C7W9 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 FAM90A24PP0C7X0 464 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 CDC34P49427 236 aaPredicted RBP12.57□□□□□ -0.4
EFNB1-201ENST00000204961 LYG1Q8N1E2 194 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 NPCDR1Q9BY65 106 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 OR4A8P0C604 315 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 WDR82Q6UXN9 313 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 SAXO1Q8IYX7 474 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 CD177Q8N6Q3 437 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 NHLRC2Q8NBF2 726 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 DDA1Q9BW61 102 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 CISD1Q9NZ45 108 aaKnown RBP12.57□□□□□ -0.4
EFNB1-201ENST00000204961 ELOA3CA0A087WX78 387 aaPredicted RBP12.57□□□□□ -0.4
EFNB1-201ENST00000204961 RAB4BP61018 213 aa12.57□□□□□ -0.4
EFNB1-201ENST00000204961 COX5AP20674 150 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 NPPCP23582 126 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 FAM214BQ7L5A3 538 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF645Q8N7E2 425 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 ACTR3CQ9C0K3 210 aaPredicted RBP12.56□□□□□ -0.4
EFNB1-201ENST00000204961 CLDN14O95500 239 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 OR10J4P0C629 311 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 LMO1P25800 156 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 PRDX2P32119 198 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 RPL29P47914 159 aaKnown RBP12.56□□□□□ -0.4
EFNB1-201ENST00000204961 FAM216AQ8WUB2 273 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 IL22RA2Q969J5 263 aa12.56□□□□□ -0.4
EFNB1-201ENST00000204961 TET2Q6N021 2002 aaPredicted RBP12.56□□□□□ -0.4
EFNB1-201ENST00000204961 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.55□□□□□ -0.4
EFNB1-201ENST00000204961 A6NNC1 897 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF705FA8MVS1 300 aaPredicted RBP12.55□□□□□ -0.4
EFNB1-201ENST00000204961 FOXH1O75593 365 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 SP9P0CG40 484 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF705DP0CH99 300 aaPredicted RBP12.55□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF705BP0CI00 300 aaPredicted RBP12.55□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF134P52741 427 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 OR5I1Q13606 314 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 GABRA6Q16445 453 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 MSMPQ1L6U9 139 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 KIAA1644Q3SXP7 199 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 SPINT2O43291 252 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 ARL14EPLP0DKL9 152 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF25P17030 456 aaPredicted RBP12.55□□□□□ -0.4
EFNB1-201ENST00000204961 ACP7Q6ZNF0 438 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms