RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 HRASP01112 189 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 ARG1P05089 322 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 PPIAL4FP0DN26 164 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 CTRB1P17538 263 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 FGF8P55075 233 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 RAB11AP62491 216 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 GNB2P62879 340 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 MEF2CQ06413 473 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 RTL8BQ17RB0 113 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 SMUG1Q53HV7 270 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 CTRB2Q6GPI1 263 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 CYB561D1Q8N8Q1 229 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 DDB2Q92466 427 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 RAB39BQ96DA2 213 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 NPCDR1Q9BY65 106 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 ENY2Q9NPA8 101 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 DCAF16Q9NXF7 216 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 CISD1Q9NZ45 108 aaKnown RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 RPUSD1Q9UJJ7 312 aaKnown RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 PPIAL4AQ9Y536 164 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 DOCK11Q5JSL3 2073 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 ANKRD11Q6UB99 2663 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 CTXND1A0A1B0GTU2 59 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 SMCO3A2RU48 225 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 C15orf61A6NNL5 157 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 C15orf62A8K5M9 175 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 SOX15O60248 233 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 GFRA3O60609 400 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 TSPAN9O75954 239 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 DAOP14920 347 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 RPS16P62249 146 aaKnown RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 RPL31P62899 125 aaKnown RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 TFF3Q07654 80 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 HNF4GQ14541 408 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 ZNF726P1Q15940 193 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 VWC2Q2TAL6 325 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 FFAR4Q5NUL3 377 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 SP5Q6BEB4 398 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 RBMS3Q6XE24 437 aaKnown RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 CENPVQ7Z7K6 275 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-201ENST00000054666 ZNF429Q86V71 674 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 TGIF2LYQ8IUE0 185 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 VKORC1L1Q8N0U8 176 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 ZNF439Q8NDP4 499 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 OR10A7Q8NGE5 316 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 OR10G4Q8NGN3 311 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 CCL17Q92583 94 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 LHX4Q969G2 390 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 RHOVQ96L33 236 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 ZNF714Q96N38 554 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 WFIKKN1Q96NZ8 548 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 ZNF251Q9BRH9 671 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 TUBA4BQ9H853 241 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 LINC00574Q9H8X3 128 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 SLC25A22Q9H936 323 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 TMEM106BQ9NUM4 274 aa6.81□□□□□ -1.32
VAMP3-201ENST00000054666 H3BQ15 152 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 TMEM178BH3BS89 294 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 NDUFB3O43676 98 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 MT-ND4LP03901 98 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 CD3EP07766 207 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 CD1BP29016 333 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 TAGLN2P37802 199 aaKnown RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 RAB5BP61020 215 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 RELBQ01201 579 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 PDLIM3Q53GG5 364 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 LRRC10Q5BKY1 277 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 ACSM6Q6P461 480 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 SLC25A48Q6ZT89 311 aaKnown RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 ZCCHC24Q8N2G6 241 aaKnown RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 RNASE6Q93091 150 aaKnown RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 TVP23CQ96ET8 276 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 P2RX4Q99571 388 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 ACTR3CQ9C0K3 210 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 MS4A5Q9H3V2 200 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 VAX2Q9UIW0 290 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 TCF19Q9Y242 345 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 PTPRQQ9UMZ3 2332 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 COLCA2A8K830 154 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 MPDU1O75352 247 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 APOA2P02652 100 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 CRYBA1P05813 215 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 FOLR2P14207 255 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 ACOT6Q3I5F7 207 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 NCMAPQ5T1S8 102 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 OR4A47Q6IF82 309 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 SSX7Q7RTT5 188 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 SLC35E3Q7Z769 313 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 OR10G9Q8NGN4 311 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 OR10G7Q8NGN6 311 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 H1FXQ92522 213 aaKnown RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 GGACTQ9BVM4 153 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 KCNIP2Q9NS61 270 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 SLC35D1Q9NTN3 355 aa6.8□□□□□ -1.32
VAMP3-201ENST00000054666 FOXA2Q9Y261 457 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-201ENST00000054666 PCNX1Q96RV3 2341 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 DSPP15924 2871 aaKnown RBP6.79□□□□□ -1.32
VAMP3-201ENST00000054666 A0A1W2PPE2 198 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 A0A1W2PPH5 198 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 FAM90A27PA6NNH2 459 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms