RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 TsnaxQ9QZE7 290 aaKnown RBP17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Egr4Q9WUF2 478 aa17.81■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ttc28Q80XJ3 2450 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Mrgpra9A0A140T8U8 332 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Prrt1O35449 306 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 P01798 113 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 PpicP30412 212 aaKnown RBP17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ccl11P48298 97 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm10384Q3UQ87 92 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Fam76bQ80XP8 339 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Tm2d3Q8BJ83 261 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr57Q8VGU7 319 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Lmo1Q924W9 156 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Smim3Q99PE5 60 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Flywch2Q9CQE9 139 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Tpsg1Q9QUL7 311 aa17.8■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Arhgef17Q80U35 2057 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm20820A0A087WPP3 222 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm28102A0A087WQL3 222 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm20911A0A087WSS0 222 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm28870A0A0A6YW38 222 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 4930579F01RikE9Q3L6 325 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Gm6594J3QM43 95 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 AcheP21836 614 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Slc6a1P31648 599 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Clec3bP43025 202 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Reg2Q08731 173 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ang4Q3TMQ6 144 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Tmem184aQ3UFJ6 425 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Kat7Q5SVQ0 613 aaKnown RBP17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Galnt14Q8BVG5 550 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Scnm1Q8K136 229 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Vmn1r59Q8R2B9 310 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr95Q8VFE2 312 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Eva1aQ91WM6 156 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Rtn4ip1Q924D0 396 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ackr1Q9QUI6 334 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 DscamQ9ERC8 2013 aa17.79■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Atxn7l3A2AWT3 347 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 SftpcP21841 193 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Wnt5bP22726 359 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Loxl1P97873 607 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 TrmoQ562D6 431 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 March1Q6NZQ8 289 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr1357Q7TQU7 313 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Cd226Q8K4F0 333 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Tlcd2Q8VC26 310 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr720Q8VF37 316 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Cacng8Q8VHW2 423 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Paip2bQ91W45 136 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Dnajc24Q91ZF0 196 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ergic1Q9DC16 290 aaKnown RBP17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr19Q9JHB2 309 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Adgrg4B7ZCC9 3073 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 4930402F06RikA2AUQ8 332 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr773F6VS78 311 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ifna1P01572 189 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Cox6a1P43024 111 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Trav6d-4Q5R1I0 115 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr876Q7TRE4 310 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Slc25a32Q8BMG8 316 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr772Q8VGC5 311 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Angpt4Q9WVH6 509 aa17.78■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Myo9bQ9QY06 2114 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Trbv15A0A0A6YYE3 115 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Aldh3b3J3QMK6 479 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 LplP11152 474 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Spi1P17433 272 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 MaoaQ64133 526 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Olfr487Q7TRU9 314 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Ankrd34cQ8BLB8 534 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Atp5sQ9CRA7 200 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Dph7Q9CYU6 477 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Rnf7Q9WTZ1 113 aa17.77■□□□□ 0.44
Ccdc88a-202ENSMUST00000109477 Hivep2Q3UHF7 2430 aa17.77■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Ighv5-15A0A0A6YWC7 117 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Aldh3b2E9Q3E1 479 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Lipo5F6QKH6 233 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 DhfrP00375 187 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 P01658 132 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Rtl6Q505G4 243 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Mob1bQ8BPB0 216 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Lpcat3Q91V01 487 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 NgbQ9ER97 151 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Prss30Q9QYZ9 310 aa17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Dnajc13D4AFX7 2248 aaKnown RBP17.76■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 TracA0A075B662 137 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm21488A0A087WR99 222 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm21497A0A087WRK3 222 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm29866A0A0A6YX04 222 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Lrrc3cA0A1B0GRI5 255 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm17657E9PWY5 170 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm7233E9PZI8 198 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm9732F6QVC4 198 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm8104K7N744 198 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Hbb-bh1P04444 147 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 DaoP18894 345 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Icam2P35330 277 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Ube2mP61082 183 aaKnown RBP17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Spata46Q4FZF2 204 aa17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms