RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Olfr1184Q8VG86 311 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Lamtor1Q9CQ22 161 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Hspb8Q9JK92 196 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm15293D3YX02 93 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Lsm10Q8QZX5 122 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slc6a8Q8VBW1 640 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ier5lQ99J55 406 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Rpl34Q9D1R9 117 aaKnown RBP14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ube2l3P68037 154 aaKnown RBP14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slc16a13Q8CE94 428 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1044Q8VGR9 314 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Sec16aA2AIX1 2377 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ighg2cF6TQW2 404 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 EomesO54839 707 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 P01864 335 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ceacam12Q3UKP4 300 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 9030612E09RikQ8CE20 140 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1336Q8VGH5 314 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slc25a37Q920G8 338 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ms4a6cQ99N08 217 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Herpud1Q9JJK5 391 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Socs6Q9JLY0 533 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Anxa10Q9QZ10 324 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Vax2Q9WTP9 292 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm5157A0A087WRH8 301 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Pate1E9Q658 125 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Sult2a4L7N245 285 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Smug1Q6P5C5 279 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr951Q9EQ94 314 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ctnnbip1Q9JJN6 81 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Tmem9bQ9JJR8 199 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Foxe3Q9QY14 288 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm29776A0A286YEC0 699 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 ThbdP15306 577 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Rnf133Q14B02 382 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Zfp386Q1WWJ5 626 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Rtp3Q5QGU6 474 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 SrfQ9JM73 504 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Tmeff2Q9QYM9 374 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 PtprdQ64487 1912 aa14.77□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fxyd3Q61835 88 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Lrrc3bQ8VCH9 259 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Olfr1324Q8VEU7 332 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Nmnat3Q99JR6 245 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Eif3iQ9QZD9 325 aaKnown RBP14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Ca3P16015 260 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Slc6a12P31651 614 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Tmem204Q7TQI0 226 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Rcc1lQ9CYF5 461 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Gm11756A2BEJ1 356 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Gm15292L7N231 93 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Olfr1246Q7TQZ6 314 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Sval2Q99N75 144 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Slc37a2Q9WU81 501 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 BC025446A0A087WQT1 134 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Birc7A2AWP0 285 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Hmga1P17095 107 aaKnown RBP14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Atf1P81269 269 aaKnown RBP14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Vmn1r236Q05A06 334 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 DhhQ61488 396 aa14.77□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Gm36864A0A1Y7VJE6 447 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Abhd14aQ922Q6 247 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Dnaja3Q99M87 480 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Gm436B1AVU6 407 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 MturnQ8CGA4 131 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Stxbp6Q8R3T5 210 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 NubplQ9CWD8 319 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 F2rl2O08675 369 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Olfr358Q7TRY5 330 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Zfp747Q8BHM7 422 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Fbxo25Q9D2Y6 357 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Pla2g12aQ9EPR2 192 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Casp8ap2Q9WUF3 1962 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Med13Q5SWW4 2171 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Olfr1009Q8VFK1 314 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Vmn1r149E9PWL6 307 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Vmn1r101E9Q365 307 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Vmn1r158G3UY92 307 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 BglapP86546 95 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Bglap2P86547 95 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 TfpiO54819 306 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Slc16a7O70451 484 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Tmem33Q9CR67 247 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Gm10358A0A1D5RLD8 333 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Gm14444A2ARW3 426 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Zfp108E9Q8I5 642 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 GapdhP16858 333 aaKnown RBP14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Megf9Q8BH27 600 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Nsun3Q8CCT7 348 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Tmem51Q99LG1 249 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Adad2Q9D5P4 478 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Gm3839S4R1W1 333 aa14.76□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Fabp4P04117 132 aa14.75□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Znf235Q61116 645 aa14.75□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Foxb1Q64732 325 aa14.75□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Olfr1335B2RVY8 335 aa14.75□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Hoxc4Q08624 264 aa14.75□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Olfr974Q8VH09 310 aa14.75□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Ly6dP35459 127 aa14.75□□□□□ -0.05
Ccdc88a-201ENSMUST00000040182 Spam1P48794 512 aa14.75□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms