RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Amy2P00688 508 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Sod1P08228 154 aaKnown RBP14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Bcl2l15Q08ED0 167 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Elavl2Q60899 360 aaKnown RBP14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 St8sia3Q64689 380 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Zfp677Q6PEP4 634 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Rab39bQ8BHC1 213 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Faap24Q8BHL6 221 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Plcxd1Q8CHS4 345 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Mbnl3Q8R003 342 aaKnown RBP14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Dok5Q91ZM9 306 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ndufb8Q9D6J5 186 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 PifoQ9D9W1 207 aa14.03□□□□□ -0.16
Trim28-201ENSMUST00000005705 P01638 115 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Clec3bP43025 202 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 St8sia5P70126 412 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Pip5k1aP70182 546 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Tmem171Q4KL18 322 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr10Q60883 311 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm21093Q6GQS8 569 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Stoml3Q6PE84 287 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 BtlaQ7TSA3 306 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Tmem251Q8BH26 163 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 C030005K15RikQ8BQN9 115 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr512Q8VFZ4 326 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr339Q8VGK8 309 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ykt6Q9CQW1 198 aa14.02□□□□□ -0.16
Trim28-201ENSMUST00000005705 Cep250Q60952 2414 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 P01658 132 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Wipf3P0C7L0 485 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Mas1P30554 324 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 LepP41160 167 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Cd55bQ61476 407 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Prrg4Q8BGN6 226 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Cnot4Q8BT14 575 aaKnown RBP14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr1294Q8VGE5 312 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 MpiQ924M7 423 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tbx19Q99ME7 446 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rpp14Q9CQH8 122 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 PacrgQ9DAK2 241 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Naa60Q9DBU2 242 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 P01746 140 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rab5cP35278 216 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Taar8bQ5QD06 344 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Cd200r4Q6XJV4 270 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr1137Q7TR40 310 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Q8BTG6 205 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Exosc6Q8BTW3 273 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rps19bp1Q8C6B9 143 aaKnown RBP14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Ube2v2Q9D2M8 145 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Neu3Q9JMH7 418 aa14.02□□□□□ -0.17
Trim28-201ENSMUST00000005705 Fbn2Q61555 2907 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Trbv15A0A0A6YYE3 115 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tdpoz1P0DMR5 365 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Psg19Q4KL31 475 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr141Q60880 325 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Ceacam10Q61400 265 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr452Q7TRV8 317 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Cstl1Q80Y72 140 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr113Q8VEU4 312 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr1201Q8VGF5 307 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr38Q8VGP4 317 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr773F6VS78 311 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Vmn1r80L7N1Z3 308 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 P2ry1P49650 373 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Srsf6Q3TWW8 339 aaKnown RBP14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Clpsl2Q3UW21 102 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Mfsd8Q8BH31 519 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 MrgprfQ8VCJ6 343 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Thoc3Q8VE80 351 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr772Q8VGC5 311 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Mus81Q91ZJ0 551 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Vamp5Q9Z2P8 102 aa14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Smg1Q8BKX6 3658 aaKnown RBP14.01□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tnrc6aQ3UHK8 1896 aaKnown RBP14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Vmn1r129E9QA94 307 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm8720K9J7F4 307 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Dhrs3O88876 302 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Egr3P43300 387 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rab4aP56371 218 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Znf250Q7TNU6 535 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Smco3Q8BQM7 225 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Lyrm2Q8R033 88 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Stard4Q99JV5 224 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Hdhd3Q9CYW4 251 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Srp19Q9D7A6 144 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Ccpg1osV9GXK1 122 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Znf551B2RUI1 696 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm6460F6YJZ8 199 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Fpr2O88536 351 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Scd2P13011 358 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rnd3P61588 244 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Vamp2P63044 116 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 IslrQ6GU68 428 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr132Q7TRI8 313 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Crispld2Q8BZQ2 495 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Snapc5Q8R2K7 98 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Q8VE95 218 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Mob1aQ921Y0 216 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Abca1P41233 2261 aa14□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms