RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W DAK1P54838 584 aaKnown RBP3.51□□□□□ -1.85
DDR48YMR173W FDC1Q03034 503 aa3.51□□□□□ -1.85
DDR48YMR173W NGL2Q03264 515 aaKnown RBP3.51□□□□□ -1.85
DDR48YMR173W NSE5Q03718 556 aa3.51□□□□□ -1.85
DDR48YMR173W YPS7Q06325 596 aa3.51□□□□□ -1.85
DDR48YMR173W MDM20Q12387 796 aaKnown RBP3.51□□□□□ -1.85
DDR48YMR173W APM4Q99186 491 aa3.51□□□□□ -1.85
DDR48YMR173W STE4P18851 423 aa3.5□□□□□ -1.85
DDR48YMR173W NMD2P38798 1089 aaKnown RBP3.5□□□□□ -1.85
DDR48YMR173W ULP2P40537 1034 aaPredicted RBP3.5□□□□□ -1.85
DDR48YMR173W PXA1P41909 870 aa3.5□□□□□ -1.85
DDR48YMR173W IES1P43579 692 aa3.5□□□□□ -1.85
DDR48YMR173W BFA1P47113 574 aa3.5□□□□□ -1.85
DDR48YMR173W YGL117WP53133 265 aa3.5□□□□□ -1.85
DDR48YMR173W SDA1P53313 767 aaKnown RBP3.5□□□□□ -1.85
DDR48YMR173W DIP5P53388 608 aa3.5□□□□□ -1.85
DDR48YMR173W CPR8P53728 308 aa3.5□□□□□ -1.85
DDR48YMR173W STP4Q07351 490 aa3.5□□□□□ -1.85
DDR48YMR173W ULA1Q12059 462 aa3.5□□□□□ -1.85
DDR48YMR173W RPS17AP02407 136 aaKnown RBP3.49□□□□□ -1.85
DDR48YMR173W LEU2P04173 364 aaPredicted RBP3.49□□□□□ -1.85
DDR48YMR173W RPS9BP05755 195 aaKnown RBP3.49□□□□□ -1.85
DDR48YMR173W RPS17BP14127 136 aaKnown RBP3.49□□□□□ -1.85
DDR48YMR173W SFP1P32432 683 aa3.49□□□□□ -1.85
DDR48YMR173W TDA3P38758 523 aa3.49□□□□□ -1.85
DDR48YMR173W YJR096WP47137 282 aa3.49□□□□□ -1.85
DDR48YMR173W NOP15P53927 220 aaPredicted RBP3.49□□□□□ -1.85
DDR48YMR173W CEF1Q03654 590 aaPredicted RBP3.49□□□□□ -1.85
DDR48YMR173W ARG7Q04728 441 aa3.49□□□□□ -1.85
DDR48YMR173W PRE4P30657 266 aa3.48□□□□□ -1.85
DDR48YMR173W HOT13P36078 116 aa3.48□□□□□ -1.85
DDR48YMR173W HXT6P39003 570 aaKnown RBP3.48□□□□□ -1.85
DDR48YMR173W HXT7P39004 570 aa3.48□□□□□ -1.85
DDR48YMR173W MNN1P39106 762 aa3.48□□□□□ -1.85
DDR48YMR173W HFI1Q12060 488 aa3.48□□□□□ -1.85
DDR48YMR173W ACO1P19414 778 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
DDR48YMR173W PPG1P32838 368 aa3.47□□□□□ -1.85
DDR48YMR173W ELF1P36053 145 aa3.47□□□□□ -1.85
DDR48YMR173W THI6P41835 540 aa3.47□□□□□ -1.85
DDR48YMR173W PSA1P41940 361 aaKnown RBP3.47□□□□□ -1.85
DDR48YMR173W GZF3P42944 551 aaKnown RBP3.47□□□□□ -1.85
DDR48YMR173W TAF4P50105 388 aa3.47□□□□□ -1.85
DDR48YMR173W PMA2P19657 947 aa3.46□□□□□ -1.86
DDR48YMR173W OAF3P36023 863 aa3.46□□□□□ -1.86
DDR48YMR173W DNM1P54861 757 aa3.46□□□□□ -1.86
DDR48YMR173W ECM9Q02202 377 aa3.46□□□□□ -1.86
DDR48YMR173W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
DDR48YMR173W SEC65P29478 273 aa3.45□□□□□ -1.86
DDR48YMR173W MRPL7P36519 292 aa3.45□□□□□ -1.86
DDR48YMR173W CDS1P38221 457 aa3.45□□□□□ -1.86
DDR48YMR173W PIH1P38768 344 aa3.45□□□□□ -1.86
DDR48YMR173W CRG1P38892 291 aaRIP-Chip data3.45□□□□□ -1.86not detected
DDR48YMR173W TMN3P40071 706 aa3.45□□□□□ -1.86
DDR48YMR173W PRM2P40534 656 aa3.45□□□□□ -1.86
DDR48YMR173W ENP2P48234 707 aaKnown RBP3.45□□□□□ -1.86
DDR48YMR173W YGR153WP48238 217 aa3.45□□□□□ -1.86
DDR48YMR173W EFR3Q03653 782 aaKnown RBP3.45□□□□□ -1.86
DDR48YMR173W MTQ2Q03920 221 aaPredicted RBP3.45□□□□□ -1.86
DDR48YMR173W RPS21BQ3E754 87 aaKnown RBP3.45□□□□□ -1.86
DDR48YMR173W HOP1P20050 605 aa3.44□□□□□ -1.86
DDR48YMR173W CNE1P27825 502 aa3.44□□□□□ -1.86
DDR48YMR173W MF(ALPHA)2P32435 120 aa3.44□□□□□ -1.86
DDR48YMR173W PRP19P32523 503 aaKnown RBP3.44□□□□□ -1.86
DDR48YMR173W MTC7P32633 139 aa3.44□□□□□ -1.86
DDR48YMR173W ECM32P32644 1121 aaKnown RBP3.44□□□□□ -1.86
DDR48YMR173W DID4P36108 232 aa3.44□□□□□ -1.86
DDR48YMR173W FTR1P40088 404 aa3.44□□□□□ -1.86
DDR48YMR173W ATG36P46983 293 aa3.44□□□□□ -1.86
DDR48YMR173W MNN11P46985 422 aaKnown RBP3.44□□□□□ -1.86
DDR48YMR173W IRC8P47046 822 aa3.44□□□□□ -1.86
DDR48YMR173W PMT3P47190 753 aa3.44□□□□□ -1.86
DDR48YMR173W YGR054WP53235 642 aaKnown RBP3.44□□□□□ -1.86
DDR48YMR173W RPS15Q01855 142 aaKnown RBP3.44□□□□□ -1.86
DDR48YMR173W THI73Q07904 523 aa3.44□□□□□ -1.86
DDR48YMR173W YTM1Q12024 460 aaPredicted RBP3.44□□□□□ -1.86
DDR48YMR173W ZPS1Q12512 249 aa3.44□□□□□ -1.86
DDR48YMR173W ADR1P07248 1323 aa3.44□□□□□ -1.86
DDR48YMR173W CPA2P03965 1118 aaKnown RBP3.43□□□□□ -1.86
DDR48YMR173W RPL7AP05737 244 aaKnown RBP3.43□□□□□ -1.86
DDR48YMR173W CDC26P14724 124 aa3.43□□□□□ -1.86
DDR48YMR173W AAD3P25612 363 aa3.43□□□□□ -1.86
DDR48YMR173W DHR2P36009 735 aaPredicted RBP3.43□□□□□ -1.86
DDR48YMR173W TYS1P36421 394 aaKnown RBP3.43□□□□□ -1.86
DDR48YMR173W DUN1P39009 513 aa3.43□□□□□ -1.86
DDR48YMR173W HLJ1P48353 224 aa3.43□□□□□ -1.86
DDR48YMR173W PIP2P52960 996 aa3.43□□□□□ -1.86
DDR48YMR173W YIP4P53093 235 aa3.43□□□□□ -1.86
DDR48YMR173W COQ6P53318 479 aa3.43□□□□□ -1.86
DDR48YMR173W YNL018CP53976 612 aa3.43□□□□□ -1.86
DDR48YMR173W YDL073WQ07454 984 aa3.43□□□□□ -1.86
DDR48YMR173W RPL7BQ12213 244 aaKnown RBP3.43□□□□□ -1.86
DDR48YMR173W AI5_ALPHAQ9ZZX1 630 aa3.43□□□□□ -1.86
DDR48YMR173W YMR084WA2P2R3 262 aa3.42□□□□□ -1.86
DDR48YMR173W TUF1P02992 437 aaKnown RBP3.42□□□□□ -1.86
DDR48YMR173W TUP1P16649 713 aa3.42□□□□□ -1.86
DDR48YMR173W RIM4P38741 713 aa3.42□□□□□ -1.86
DDR48YMR173W PPE1P38796 400 aa3.42□□□□□ -1.86
DDR48YMR173W OAF1P39720 1047 aaPredicted RBP3.42□□□□□ -1.86
DDR48YMR173W LRO1P40345 661 aa3.42□□□□□ -1.86
DDR48YMR173W YDL183CP48569 320 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms