RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	MPS1	P54199	764 aa		4.87	□□□□□ -1.63
YEA4	YEL004W	NOP14	Q99207	810 aa	Known RBP	4.87	□□□□□ -1.63
YEA4	YEL004W	MGS1	P40151	587 aa		4.86	□□□□□ -1.63
YEA4	YEL004W	BFA1	P47113	574 aa		4.86	□□□□□ -1.63
YEA4	YEL004W	RPL8A	P17076	256 aa	Known RBP	4.85	□□□□□ -1.63
YEA4	YEL004W	ULP2	P40537	1034 aa	Predicted RBP	4.85	□□□□□ -1.63
YEA4	YEL004W	BPL1	P48445	690 aa	Predicted RBP	4.85	□□□□□ -1.63
YEA4	YEL004W	SDA1	P53313	767 aa	Known RBP	4.85	□□□□□ -1.63
YEA4	YEL004W	STP1	Q00947	519 aa		4.85	□□□□□ -1.63
YEA4	YEL004W	TIM50	Q02776	476 aa		4.85	□□□□□ -1.63
YEA4	YEL004W	STP4	Q07351	490 aa		4.85	□□□□□ -1.63
YEA4	YEL004W	GEP3	Q08622	556 aa		4.85	□□□□□ -1.63
YEA4	YEL004W	PMA2	P19657	947 aa		4.84	□□□□□ -1.63
YEA4	YEL004W	YIP4	P53093	235 aa		4.84	□□□□□ -1.63
YEA4	YEL004W	DAK1	P54838	584 aa	Known RBP	4.84	□□□□□ -1.63
YEA4	YEL004W	TUP1	P16649	713 aa		4.83	□□□□□ -1.64
YEA4	YEL004W	MRPL7	P36519	292 aa		4.83	□□□□□ -1.64
YEA4	YEL004W	RIM4	P38741	713 aa		4.83	□□□□□ -1.64
YEA4	YEL004W	PXA1	P41909	870 aa		4.83	□□□□□ -1.64
YEA4	YEL004W	SWI6	P09959	803 aa		4.82	□□□□□ -1.64
YEA4	YEL004W	PRP22	P24384	1145 aa	Known RBP	4.82	□□□□□ -1.64
YEA4	YEL004W	TDA3	P38758	523 aa		4.82	□□□□□ -1.64
YEA4	YEL004W	PPE1	P38796	400 aa		4.82	□□□□□ -1.64
YEA4	YEL004W	CRG1	P38892	291 aa	RIP-Chip data	4.82	□□□□□ -1.64	not detected
YEA4	YEL004W	MNN1	P39106	762 aa		4.82	□□□□□ -1.64
YEA4	YEL004W	RET2	P43621	546 aa		4.82	□□□□□ -1.64
YEA4	YEL004W	SPO1	P53541	631 aa		4.82	□□□□□ -1.64
YEA4	YEL004W	ZPS1	Q12512	249 aa		4.82	□□□□□ -1.64
YEA4	YEL004W	RPL7A	P05737	244 aa	Known RBP	4.81	□□□□□ -1.64
YEA4	YEL004W	ECM32	P32644	1121 aa	Known RBP	4.81	□□□□□ -1.64
YEA4	YEL004W	CKB2	P38930	258 aa		4.81	□□□□□ -1.64
YEA4	YEL004W	PSA1	P41940	361 aa	Known RBP	4.81	□□□□□ -1.64
YEA4	YEL004W	TDA9	Q04545	1251 aa		4.81	□□□□□ -1.64
YEA4	YEL004W	RPL7B	Q12213	244 aa	Known RBP	4.81	□□□□□ -1.64
YEA4	YEL004W	RPS17A	P02407	136 aa	Known RBP	4.8	□□□□□ -1.64
YEA4	YEL004W	CPA2	P03965	1118 aa	Known RBP	4.8	□□□□□ -1.64
YEA4	YEL004W	AQY1	P0CD91	305 aa		4.8	□□□□□ -1.64
YEA4	YEL004W	RPS17B	P14127	136 aa	Known RBP	4.8	□□□□□ -1.64
YEA4	YEL004W	PRE4	P30657	266 aa		4.8	□□□□□ -1.64
YEA4	YEL004W	CDS1	P38221	457 aa		4.8	□□□□□ -1.64
YEA4	YEL004W	FTR1	P40088	404 aa		4.8	□□□□□ -1.64
YEA4	YEL004W	YGR054W	P53235	642 aa	Known RBP	4.8	□□□□□ -1.64
YEA4	YEL004W	NOP15	P53927	220 aa	Predicted RBP	4.8	□□□□□ -1.64
YEA4	YEL004W	YNL018C	P53976	612 aa		4.8	□□□□□ -1.64
YEA4	YEL004W	DNM1	P54861	757 aa		4.8	□□□□□ -1.64
YEA4	YEL004W	MFM1	Q02783	413 aa		4.8	□□□□□ -1.64
YEA4	YEL004W	FDC1	Q03034	503 aa		4.8	□□□□□ -1.64
YEA4	YEL004W	EFR3	Q03653	782 aa	Known RBP	4.8	□□□□□ -1.64
YEA4	YEL004W	UTP14	Q04500	899 aa	Known RBP	4.8	□□□□□ -1.64
YEA4	YEL004W	RPS21B	Q3E754	87 aa	Known RBP	4.8	□□□□□ -1.64
YEA4	YEL004W	YUR1	P26725	428 aa		4.79	□□□□□ -1.64
YEA4	YEL004W	THI6	P41835	540 aa		4.79	□□□□□ -1.64
YEA4	YEL004W	YJR096W	P47137	282 aa		4.79	□□□□□ -1.64
YEA4	YEL004W	HLJ1	P48353	224 aa		4.79	□□□□□ -1.64
YEA4	YEL004W	ATP23	P53722	227 aa		4.79	□□□□□ -1.64
YEA4	YEL004W	ADR1	P07248	1323 aa		4.78	□□□□□ -1.64
YEA4	YEL004W	SEC3	P33332	1336 aa	Known RBP	4.78	□□□□□ -1.64
YEA4	YEL004W	CNE1	P27825	502 aa		4.78	□□□□□ -1.64
YEA4	YEL004W	PRP19	P32523	503 aa	Known RBP	4.78	□□□□□ -1.64
YEA4	YEL004W	BEM3	P32873	1128 aa		4.78	□□□□□ -1.64
YEA4	YEL004W	PIH1	P38768	344 aa		4.78	□□□□□ -1.64
YEA4	YEL004W	NMD2	P38798	1089 aa	Known RBP	4.78	□□□□□ -1.64
YEA4	YEL004W	ORM2	Q06144	216 aa		4.78	□□□□□ -1.64
YEA4	YEL004W	HEM1	P09950	548 aa	Predicted RBP	4.77	□□□□□ -1.65
YEA4	YEL004W	TAF4	P50105	388 aa		4.77	□□□□□ -1.65
YEA4	YEL004W	BUD17	P53727	317 aa		4.77	□□□□□ -1.65
YEA4	YEL004W	YPL068C	Q02749	293 aa		4.77	□□□□□ -1.65
YEA4	YEL004W	PPN1	Q04119	674 aa		4.77	□□□□□ -1.65
YEA4	YEL004W	PRS5	Q12265	496 aa	Known RBP	4.77	□□□□□ -1.65
YEA4	YEL004W	TYS1	P36421	394 aa	Known RBP	4.76	□□□□□ -1.65
YEA4	YEL004W	IES1	P43579	692 aa		4.76	□□□□□ -1.65
YEA4	YEL004W	COQ6	P53318	479 aa		4.76	□□□□□ -1.65
YEA4	YEL004W	THI73	Q07904	523 aa		4.76	□□□□□ -1.65
YEA4	YEL004W	GLN4	P13188	809 aa	Known RBP	4.75	□□□□□ -1.65
YEA4	YEL004W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
YEA4	YEL004W	DUN1	P39009	513 aa		4.75	□□□□□ -1.65
YEA4	YEL004W	PRM2	P40534	656 aa		4.75	□□□□□ -1.65
YEA4	YEL004W	YJL043W	P47053	257 aa		4.75	□□□□□ -1.65
YEA4	YEL004W	YGR153W	P48238	217 aa		4.75	□□□□□ -1.65
YEA4	YEL004W	RPS15	Q01855	142 aa	Known RBP	4.75	□□□□□ -1.65
YEA4	YEL004W	SEC65	P29478	273 aa		4.74	□□□□□ -1.65
YEA4	YEL004W	EHT1	P38295	451 aa		4.74	□□□□□ -1.65
YEA4	YEL004W	HXT6	P39003	570 aa	Known RBP	4.74	□□□□□ -1.65
YEA4	YEL004W	HXT7	P39004	570 aa		4.74	□□□□□ -1.65
YEA4	YEL004W	BST1	P43571	1029 aa		4.74	□□□□□ -1.65
YEA4	YEL004W	NMD5	P46970	1048 aa		4.74	□□□□□ -1.65
YEA4	YEL004W	HLR1	Q04429	423 aa		4.74	□□□□□ -1.65
YEA4	YEL004W	YDL073W	Q07454	984 aa		4.74	□□□□□ -1.65
YEA4	YEL004W	YPL216W	Q08964	1102 aa		4.74	□□□□□ -1.65
YEA4	YEL004W	MRPL9	P31334	269 aa		4.73	□□□□□ -1.65
YEA4	YEL004W	MTC7	P32633	139 aa		4.73	□□□□□ -1.65
YEA4	YEL004W	RPC34	P32910	317 aa		4.73	□□□□□ -1.65
YEA4	YEL004W	EXO1	P39875	702 aa		4.73	□□□□□ -1.65
YEA4	YEL004W	GZF3	P42944	551 aa	Known RBP	4.73	□□□□□ -1.65
YEA4	YEL004W	YFL015C	P43578	164 aa		4.73	□□□□□ -1.65
YEA4	YEL004W	ECM9	Q02202	377 aa		4.73	□□□□□ -1.65
YEA4	YEL004W	RSC9	Q03124	581 aa		4.73	□□□□□ -1.65
YEA4	YEL004W	CEF1	Q03654	590 aa	Predicted RBP	4.73	□□□□□ -1.65
YEA4	YEL004W	MTQ2	Q03920	221 aa	Predicted RBP	4.73	□□□□□ -1.65
YEA4	YEL004W	IRC3	Q06683	689 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms