RNA–Protein interactions for RNA: ENST00000642114.1

SAMMSON-227, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,199 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-227ENST00000642114 PODNQ7Z5L7 613 aa7.49□□□□□ -1.21
SAMMSON-227ENST00000642114 CARD11Q9BXL7 1154 aa7.49□□□□□ -1.21
SAMMSON-227ENST00000642114 ZNF330Q9Y3S2 320 aaPredicted RBP7.49□□□□□ -1.21
SAMMSON-227ENST00000642114 BRCA1P38398 1863 aaKnown RBP7.49□□□□□ -1.21
SAMMSON-227ENST00000642114 IQCA1LA6NCM1 817 aa7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 ERVV-2B6SEH9 535 aa7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 HSP90AB1P08238 724 aaKnown RBP7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 PHKG2P15735 406 aa7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 CHRNA5P30532 468 aa7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 LBX1P52954 281 aa7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 DDR1Q08345 913 aa7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 LDHDQ86WU2 507 aa7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 BEND7Q8N7W2 519 aaPredicted RBP7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 TTLL6Q8N841 843 aa7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 NSFL1CQ9UNZ2 370 aaKnown RBP7.48□□□□□ -1.21
SAMMSON-227ENST00000642114 TMEM88BA6NKF7 163 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 NFKBIEO00221 500 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 POLRMTO00411 1230 aaKnown RBP7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 BCRP11274 1271 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 CLN3Q13286 438 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 NBPF10Q6P3W6 841 aaKnown RBP7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 NBPF15Q8N660 670 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 GRIP2Q9C0E4 1043 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 PCDHB11Q9Y5F2 797 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 CNTNAP5Q8WYK1 1306 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 PASKQ96RG2 1323 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 LTBP3Q9NS15 1303 aa7.47□□□□□ -1.21
SAMMSON-227ENST00000642114 FYB1O15117 783 aa7.46□□□□□ -1.22
SAMMSON-227ENST00000642114 HSPA8P11142 646 aaKnown RBP7.46□□□□□ -1.22
SAMMSON-227ENST00000642114 MX2P20592 715 aa7.46□□□□□ -1.22
SAMMSON-227ENST00000642114 FBLN1P23142 703 aa7.46□□□□□ -1.22
SAMMSON-227ENST00000642114 TM4SF1P30408 202 aa7.46□□□□□ -1.22
SAMMSON-227ENST00000642114 NR1H3Q13133 447 aa7.46□□□□□ -1.22
SAMMSON-227ENST00000642114 TAS1R3Q7RTX0 852 aa7.46□□□□□ -1.22
SAMMSON-227ENST00000642114 TIMMDC1Q9NPL8 285 aa7.46□□□□□ -1.22
SAMMSON-227ENST00000642114 RASSF10A6NK89 507 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 CCDC85CA6NKD9 419 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 SPATA31C2B4DYI2 1134 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 H0YIN7 160 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 CRKLP46109 303 aaKnown RBP7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 WDR44Q5JSH3 913 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 SOGA3Q5TF21 947 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 ACDQ96AP0 544 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 SLC4A9Q96Q91 983 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 NUCKS1Q9H1E3 243 aaKnown RBP7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 GGNBP2Q9H3C7 697 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
SAMMSON-227ENST00000642114 TIAM2Q8IVF5 1701 aa7.44□□□□□ -1.22
SAMMSON-227ENST00000642114 ITGB4P16144 1822 aa7.44□□□□□ -1.22
SAMMSON-227ENST00000642114 F11P03951 625 aa7.44□□□□□ -1.22
SAMMSON-227ENST00000642114 SCTRP47872 440 aa7.44□□□□□ -1.22
SAMMSON-227ENST00000642114 IL27Q8NEV9 243 aa7.44□□□□□ -1.22
SAMMSON-227ENST00000642114 SRP68Q9UHB9 627 aaKnown RBP7.44□□□□□ -1.22
SAMMSON-227ENST00000642114 WASHC2AQ641Q2 1341 aa7.44□□□□□ -1.22
SAMMSON-227ENST00000642114 RGPD2P0DJD1 1756 aa7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 MSTNO14793 375 aa7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 CA12O43570 354 aa7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 NEUROD2Q15784 382 aa7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 DEFB115Q30KQ5 88 aa7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 PNMA8AQ86V59 439 aaPredicted RBP7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 C2CD5Q86YS7 1000 aa7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 TAOK3Q9H2K8 898 aa7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 OSBPL3Q9H4L5 887 aa7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 COL5A3P25940 1745 aaPredicted RBP7.43□□□□□ -1.22
SAMMSON-227ENST00000642114 TRAK2O60296 914 aa7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 ECE1P42892 770 aa7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 CABP4P57796 275 aa7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 PLA2G4EQ3MJ16 856 aa7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 AMOTQ4VCS5 1084 aa7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 USPL1Q5W0Q7 1092 aa7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 TESK2Q96S53 571 aa7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 TAF1DQ9H5J8 278 aaPredicted RBP7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 RAB6BQ9NRW1 208 aa7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 WDR33Q9C0J8 1336 aaKnown RBP7.42□□□□□ -1.22
SAMMSON-227ENST00000642114 PTCD1O75127 700 aaKnown RBP7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 DDNO94850 711 aaPredicted RBP7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 MYCP01106 439 aaPredicted RBP7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 GNRH1P01148 92 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 SERPINB2P05120 415 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 GTF2E1P29083 439 aaPredicted RBP7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 PDE6BP35913 854 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 MAP2K3P46734 347 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 NFIXQ14938 502 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 CDCA8Q53HL2 280 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 INTS5Q6P9B9 1019 aaKnown RBP7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 CNKSR1Q969H4 720 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 ESYT1Q9BSJ8 1104 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 BRIP1Q9BX63 1249 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 NARFQ9UHQ1 456 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 PHF24Q9UPV7 400 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 NDUFB9Q9Y6M9 179 aa7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 SOS1Q07889 1333 aaPredicted RBP7.41□□□□□ -1.22
SAMMSON-227ENST00000642114 APBB1O00213 710 aa7.4□□□□□ -1.22
SAMMSON-227ENST00000642114 PPM1GO15355 546 aaPredicted RBP7.4□□□□□ -1.22
SAMMSON-227ENST00000642114 OIP5O43482 229 aa7.4□□□□□ -1.22
SAMMSON-227ENST00000642114 C21orf2O43822 256 aa7.4□□□□□ -1.22
SAMMSON-227ENST00000642114 PLEKHO1Q53GL0 409 aaPredicted RBP7.4□□□□□ -1.22
SAMMSON-227ENST00000642114 ERICH6Q7L0X2 663 aa7.4□□□□□ -1.22
SAMMSON-227ENST00000642114 BANK1Q8NDB2 785 aa7.4□□□□□ -1.22
SAMMSON-227ENST00000642114 CFHR5Q9BXR6 569 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms