RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 MYH7P12883 1935 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 MAP4K4O95819 1239 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-225ENST00000640900 CHMLP26374 656 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 ADD2P35612 726 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 HDLBPQ00341 1268 aaKnown RBP11.05□□□□□ -0.64
SCARB2-225ENST00000640900 ZMYM1Q5SVZ6 1142 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 C9orf131Q5VYM1 1079 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 SPTY2D1Q68D10 685 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-225ENST00000640900 AGBL3Q8NEM8 1001 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 DPF2Q92785 391 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 MAST2Q6P0Q8 1798 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 GAKO14976 1311 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 MYO3BQ8WXR4 1341 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 ZNF541Q9H0D2 1346 aa11.05□□□□□ -0.64
SCARB2-225ENST00000640900 TIAM2Q8IVF5 1701 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 AK9Q5TCS8 1911 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 G3V3G9 751 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
SCARB2-225ENST00000640900 FRAT2O75474 233 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-225ENST00000640900 RAD17O75943 681 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 CHGBP05060 677 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 ZFYP08048 801 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-225ENST00000640900 PDE6AP16499 860 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 RPS12P25398 132 aaKnown RBP11.04□□□□□ -0.64
SCARB2-225ENST00000640900 ZNF280AP59817 542 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-225ENST00000640900 MECOMQ03112 1051 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 MAP3K12Q12852 859 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 CHAF1AQ13111 956 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-225ENST00000640900 TNIP1Q15025 636 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 CIAPIN1Q6FI81 312 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 ZBED3Q96IU2 234 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-225ENST00000640900 MXD3Q9BW11 206 aa11.04□□□□□ -0.64
SCARB2-225ENST00000640900 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 HIP1O00291 1037 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 LDHBP07195 334 aaKnown RBP11.03□□□□□ -0.64
SCARB2-225ENST00000640900 PPP4CP60510 307 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 C8orf34Q49A92 452 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 HHIPL2Q6UWX4 724 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 ERICH6Q7L0X2 663 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
SCARB2-225ENST00000640900 GPC2Q8N158 579 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCARB2-225ENST00000640900 RNF181Q9P0P0 153 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 JAG2Q9Y219 1238 aa11.03□□□□□ -0.64
SCARB2-225ENST00000640900 CDC45O75419 566 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 IDH1O75874 414 aaKnown RBP11.02□□□□□ -0.65
SCARB2-225ENST00000640900 EIF6P56537 245 aaKnown RBP11.02□□□□□ -0.65
SCARB2-225ENST00000640900 LRRFIP1Q32MZ4 808 aaKnown RBP11.02□□□□□ -0.65
SCARB2-225ENST00000640900 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 SLC9C2Q5TAH2 1124 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 ZSCAN25Q6NSZ9 544 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 ADGRA1Q86SQ6 560 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 MAGEB6Q8N7X4 407 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 APPBP2Q92624 585 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 OSBP2Q969R2 916 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 RILPL2Q969X0 211 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 L3MBTL3Q96JM7 780 aaPredicted RBP11.02□□□□□ -0.65
SCARB2-225ENST00000640900 ZDHHC15Q96MV8 337 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 FSD1Q9BTV5 496 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 HELLSQ9NRZ9 838 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 LRP2BPQ9P2M1 347 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 ABCF2Q9UG63 623 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 ZNF532Q9HCE3 1301 aa11.02□□□□□ -0.65
SCARB2-225ENST00000640900 GPR75-ASB3A0A0A6YYF3 556 aa11.01□□□□□ -0.65
SCARB2-225ENST00000640900 A0A0D9SFI3 127 aa11.01□□□□□ -0.65
SCARB2-225ENST00000640900 SGSM2O43147 1006 aa11.01□□□□□ -0.65
SCARB2-225ENST00000640900 SCNN1DP51172 638 aa11.01□□□□□ -0.65
SCARB2-225ENST00000640900 APOBEC3HQ6NTF7 200 aaKnown RBP11.01□□□□□ -0.65
SCARB2-225ENST00000640900 FAM227BQ96M60 508 aa11.01□□□□□ -0.65
SCARB2-225ENST00000640900 RIOK1Q9BRS2 568 aaKnown RBP11.01□□□□□ -0.65
SCARB2-225ENST00000640900 IL25Q9H293 177 aa11.01□□□□□ -0.65
SCARB2-225ENST00000640900 MAST3O60307 1309 aa11.01□□□□□ -0.65
SCARB2-225ENST00000640900 RAD50Q92878 1312 aa11.01□□□□□ -0.65
SCARB2-225ENST00000640900 MYH2Q9UKX2 1941 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 GLTPD2A6NH11 291 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 FOXP2O15409 715 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 PRR29P0C7W0 189 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 GMPSP49915 693 aaPredicted RBP11□□□□□ -0.65
SCARB2-225ENST00000640900 GSTO1P78417 241 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 NMIQ13287 307 aaPredicted RBP11□□□□□ -0.65
SCARB2-225ENST00000640900 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
SCARB2-225ENST00000640900 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 PUS7LQ9H0K6 701 aaKnown RBP11□□□□□ -0.65
SCARB2-225ENST00000640900 RAI14Q9P0K7 980 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 TTF2Q9UNY4 1162 aaKnown RBP11□□□□□ -0.65
SCARB2-225ENST00000640900 DAGLAQ9Y4D2 1042 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 MROH7-TTC4A0A0A0MT08 1334 aa11□□□□□ -0.65
SCARB2-225ENST00000640900 WDR90Q96KV7 1748 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 EPB41L2O43491 1005 aaKnown RBP10.99□□□□□ -0.65
SCARB2-225ENST00000640900 LDHCP07864 332 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 USP17L8P0C7I0 530 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 CYP7A1P22680 504 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 RHBDL3P58872 404 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 MCMDC2Q4G0Z9 681 aa10.99□□□□□ -0.65
SCARB2-225ENST00000640900 DZIP1Q86YF9 867 aaKnown RBP10.99□□□□□ -0.65
SCARB2-225ENST00000640900 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms