RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 HOXC9P31274 260 aa16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 MRPL12P52815 198 aaKnown RBP16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 PLCB3Q01970 1234 aa16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 GUCA1BQ9UMX6 200 aa16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 PARP1P09874 1014 aaKnown RBP16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 ZBTB40Q9NUA8 1239 aa16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 RBM28Q9NW13 759 aaKnown RBP16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 IFNKQ9P0W0 207 aa16.63■□□□□ 0.25
HNRNPU-226ENST00000640218 NUP160Q12769 1436 aa16.62■□□□□ 0.25
HNRNPU-226ENST00000640218 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
HNRNPU-226ENST00000640218 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
HNRNPU-226ENST00000640218 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
HNRNPU-226ENST00000640218 PARD3Q8TEW0 1356 aa16.62■□□□□ 0.25
HNRNPU-226ENST00000640218 LZTFL1Q9NQ48 299 aa16.62■□□□□ 0.25
HNRNPU-226ENST00000640218 EYA3Q99504 573 aa16.62■□□□□ 0.25
HNRNPU-226ENST00000640218 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 MRPS9P82933 396 aaKnown RBP16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 ZNF174Q15697 407 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 V9GYY5 206 aaPredicted RBP16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 KIF4AO95239 1232 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 BAG6P46379 1132 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 GNPATO15228 680 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 CPA1P15085 419 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 FBF1Q8TES7 1133 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 CCDC77Q9BR77 488 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 XRCC6P12956 609 aaKnown RBP eCLIP16.61■□□□□ 0.253e-19■□□□□ 9.8
HNRNPU-226ENST00000640218 ZBTB9Q96C00 473 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 HELLSQ9NRZ9 838 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 CCDC129Q6ZRS4 1044 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 ARHGAP27Q6ZUM4 889 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 C19orf44Q9H6X5 657 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 TIMM10P62072 90 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 RAB3GAP1Q15042 981 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 DCAF17Q5H9S7 520 aaPredicted RBP16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 PKD2L1Q9P0L9 805 aa16.61■□□□□ 0.25
HNRNPU-226ENST00000640218 ATP10BO94823 1461 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 BACH1O14867 736 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 MXRA7P84157 204 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 IQUBQ8NA54 791 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 LETM2Q2VYF4 491 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 KRT222Q8N1A0 295 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 GOLGA1Q92805 767 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 ZNF569Q5MCW4 686 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 B4E1Z4 1266 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 CSPG5O95196 566 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 CCDC63Q8NA47 563 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 USP26Q9BXU7 913 aa16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 NSRP1Q9H0G5 558 aaKnown RBP16.6■□□□□ 0.25
HNRNPU-226ENST00000640218 A0A1W2PP64 1363 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 A0A1B0GVL5 298 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 TRAPPC3LQ5T215 181 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 TEX11Q8IYF3 940 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 IP6K1Q92551 441 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 TEX14Q8IWB6 1497 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 RAD50Q92878 1312 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 MSL1Q68DK7 614 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 ATP2A1O14983 1001 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 RAPGEF1Q13905 1077 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 G2E3Q7L622 706 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 OPA1O60313 960 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 ATRIPQ8WXE1 791 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 BTG4Q9NY30 223 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 ITGA6P23229 1130 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 TTC6Q86TZ1 520 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 CARD14Q9BXL6 1004 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 CEP83Q9Y592 693 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 UGGT2Q9NYU1 1516 aa16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 SLU7O95391 586 aaKnown RBP16.59■□□□□ 0.25
HNRNPU-226ENST00000640218 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 SELENOSQ9BQE4 189 aa16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 PTPRKQ15262 1439 aa16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 SV2BQ7L1I2 683 aa16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 BCS1LQ9Y276 419 aa16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 SMIM23A6NLE4 172 aa16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 PPP1R9BQ96SB3 815 aa16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 LUC7L2Q9Y383 392 aaKnown RBP16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 INTS4Q96HW7 963 aaKnown RBP16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 ARMT1Q9H993 441 aa16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 MAP3K19Q56UN5 1328 aa16.58■□□□□ 0.24
HNRNPU-226ENST00000640218 CCDC65Q8IXS2 484 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 IFT81Q8WYA0 676 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 ATP6V0A2Q9Y487 856 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 CCT6AP40227 531 aaKnown RBP16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 HSPA4P34932 840 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 SRRTQ9BXP5 876 aaKnown RBP16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 CTNND2Q9UQB3 1225 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 UFL1O94874 794 aa16.57■□□□□ 0.24
HNRNPU-226ENST00000640218 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms