RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 MAP4K4O95819 1239 aaPredicted RBP12.12□□□□□ -0.47
SMARCA2-266ENST00000639760 CTAGE8P0CG41 777 aa12.12□□□□□ -0.47
SMARCA2-266ENST00000639760 TOP1P11387 765 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-266ENST00000639760 CTAGE6Q86UF2 777 aa12.12□□□□□ -0.47
SMARCA2-266ENST00000639760 CTAGE4Q8IX94 777 aa12.12□□□□□ -0.47
SMARCA2-266ENST00000639760 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
SMARCA2-266ENST00000639760 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
SMARCA2-266ENST00000639760 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
SMARCA2-266ENST00000639760 ENO4A6NNW6 628 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 STX10O60499 249 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 PDHBP11177 359 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 SLC8A1P32418 973 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 GGCXP38435 758 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 KCNB1Q14721 858 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 NCAPHQ15003 741 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 FILIP1LQ4L180 1135 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 OR8K1Q8NGG5 319 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 STK31Q9BXU1 1019 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 TRPM2O94759 1503 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 LMOD1P29536 600 aaPredicted RBP12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 UBASH3AP57075 661 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 TTLL7Q6ZT98 887 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 CRACR2AQ9BSW2 395 aa12.11□□□□□ -0.47
SMARCA2-266ENST00000639760 PPFIA2O75334 1257 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 COG1Q8WTW3 980 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 PAGR1Q9BTK6 254 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 CHCHD3Q9NX63 227 aaKnown RBP12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 A6NNZ2 444 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 DIAPH1O60610 1272 aaKnown RBP12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 FCHSD2O94868 740 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 RPSAP08865 295 aaKnown RBP12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 PIP4K2BP78356 416 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 TUBB8Q3ZCM7 444 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 ARMC3Q5W041 872 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 FAM228AQ86W67 206 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 SCLT1Q96NL6 688 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 SUDS3Q9H7L9 328 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 NEURL4Q96JN8 1562 aa12.1□□□□□ -0.47
SMARCA2-266ENST00000639760 ASXL2Q76L83 1435 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 SETD1BQ9UPS6 1966 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 PFKFB2O60825 505 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 MCM3P25205 808 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 AMPHP49418 695 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 CEBPZQ03701 1054 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 SF3B2Q13435 895 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 E2F5Q15329 346 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 CFAP100Q494V2 611 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 FSIP1Q8NA03 581 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 HOOK2Q96ED9 719 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 PREX1Q8TCU6 1659 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 IKBKBO14920 756 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 SERPINC1P01008 464 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 ATP1A3P13637 1013 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 DCTN1Q14203 1278 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 WHAMMP3Q1A5X7 153 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 CYB5D1Q6P9G0 228 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 PIK3R5Q8WYR1 880 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 DPF2Q92785 391 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 SH3GL2Q99962 352 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 KIAA1468Q9P260 1216 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 MAP3K4Q9Y6R4 1608 aa12.09□□□□□ -0.47
SMARCA2-266ENST00000639760 GOLGA6L7A0A1B0GV03 622 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 KIF5CO60282 957 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 PRKAR2BP31323 418 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 DRP2Q13474 957 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 RNF187Q5TA31 235 aaPredicted RBP12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 DESI2Q9BSY9 194 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 MRPL44Q9H9J2 332 aaKnown RBP12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 SPG7Q9UQ90 795 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 AGPSO00116 658 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 RTN3O95197 1032 aaPredicted RBP12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 MAGEA8P43361 318 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 CAPRIN2Q6IMN6 1127 aaKnown RBP12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 BRAPQ7Z569 592 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 NOA1Q8NC60 698 aaKnown RBP12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 CCDC148Q8NFR7 591 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 TPX2Q9ULW0 747 aaKnown RBP12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
SMARCA2-266ENST00000639760 CTAGE9A4FU28 777 aa12.07□□□□□ -0.48
SMARCA2-266ENST00000639760 PYGLP06737 847 aa12.07□□□□□ -0.48
SMARCA2-266ENST00000639760 CCDC175P0C221 793 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms