RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 DMWDQ09019 674 aa4.96□□□□□ -1.61
CCDC7-213ENST00000639290 USHBP1Q8N6Y0 703 aa4.96□□□□□ -1.61
CCDC7-213ENST00000639290 HLA-CQ95604 372 aa4.96□□□□□ -1.61
CCDC7-213ENST00000639290 COG3Q96JB2 828 aa4.96□□□□□ -1.61
CCDC7-213ENST00000639290 SEMA4AQ9H3S1 761 aa4.96□□□□□ -1.61
CCDC7-213ENST00000639290 GPR179Q6PRD1 2367 aa4.96□□□□□ -1.61
CCDC7-213ENST00000639290 IREB2P48200 963 aaKnown RBP4.96□□□□□ -1.62
CCDC7-213ENST00000639290 KIAA0319Q5VV43 1072 aa4.96□□□□□ -1.62
CCDC7-213ENST00000639290 HFE2Q6ZVN8 426 aa4.96□□□□□ -1.62
CCDC7-213ENST00000639290 ASCL5Q7RTU5 278 aa4.96□□□□□ -1.62
CCDC7-213ENST00000639290 SUGP1Q8IWZ8 645 aaKnown RBP4.96□□□□□ -1.62
CCDC7-213ENST00000639290 ANKRD13AQ8IZ07 590 aa4.96□□□□□ -1.62
CCDC7-213ENST00000639290 PPM1EQ8WY54 764 aa4.96□□□□□ -1.62
CCDC7-213ENST00000639290 RNPC3Q96LT9 517 aaKnown RBP4.96□□□□□ -1.62
CCDC7-213ENST00000639290 ARHGAP39Q9C0H5 1083 aa4.96□□□□□ -1.62
CCDC7-213ENST00000639290 VCANP13611 3396 aa4.96□□□□□ -1.62
CCDC7-213ENST00000639290 FAM208BQ5VWN6 2430 aa4.96□□□□□ -1.62
CCDC7-213ENST00000639290 PTCD1O75127 700 aaKnown RBP4.95□□□□□ -1.62
CCDC7-213ENST00000639290 CHRM1P11229 460 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-213ENST00000639290 ADGRE1Q14246 886 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 AMOTQ4VCS5 1084 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 DPP8Q6V1X1 898 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-213ENST00000639290 ZBTB38Q8NAP3 1195 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-213ENST00000639290 SPOCK2Q92563 424 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 RMDN1Q96DB5 314 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 ANGEL1Q9UNK9 670 aaKnown RBP4.95□□□□□ -1.62
CCDC7-213ENST00000639290 MYBBP1AQ9BQG0 1328 aaKnown RBP4.95□□□□□ -1.62
CCDC7-213ENST00000639290 BBOX1O75936 387 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 CETPP11597 493 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 HOXB3P14651 431 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-213ENST00000639290 LRRC26Q2I0M4 334 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 C9orf50Q5SZB4 431 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
CCDC7-213ENST00000639290 RIC3Q7Z5B4 369 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 PRUNE2Q8WUY3 3088 aa4.95□□□□□ -1.62
CCDC7-213ENST00000639290 NTRK1P04629 796 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 LEXMQ3ZCV2 418 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 BRI3BPQ8WY22 251 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 NKD2Q969F2 451 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-213ENST00000639290 PRDM12Q9H4Q4 367 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 HMX1Q9NP08 348 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-213ENST00000639290 ALG13Q9NP73 1137 aaKnown RBP4.94□□□□□ -1.62
CCDC7-213ENST00000639290 TERF2IPQ9NYB0 399 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 KCNH4Q9UQ05 1017 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 FAM50BQ9Y247 325 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 COL4A6Q14031 1691 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 RPAP1Q9BWH6 1393 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-213ENST00000639290 GTPBP6O43824 516 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-213ENST00000639290 HMGCRP04035 888 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 TFF2Q03403 129 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 SUPT20HL1Q3ZLR7 823 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 HERC4Q5GLZ8 1057 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-213ENST00000639290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.94□□□□□ -1.62
CCDC7-213ENST00000639290 TRMT44Q8IYL2 757 aaKnown RBP4.94□□□□□ -1.62
CCDC7-213ENST00000639290 MYOZ2Q9NPC6 264 aa4.94□□□□□ -1.62
CCDC7-213ENST00000639290 CCL15-CCL14A0A0B4J2E2 113 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 PRKCZQ05513 592 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 GOLGA2Q08379 1002 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 CCL15Q16663 113 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 C1orf53Q5VUE5 145 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 NPM2Q86SE8 214 aaKnown RBP4.93□□□□□ -1.62
CCDC7-213ENST00000639290 ADSSL1Q8N142 457 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 EYA3Q99504 573 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 FSD1Q9BTV5 496 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 LMCD1Q9NZU5 365 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 MSRAQ9UJ68 235 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 ANKRD36CQ5JPF3 1778 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 CHD6Q8TD26 2715 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 GJA5P36382 358 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 RBM26Q5T8P6 1007 aaKnown RBP4.93□□□□□ -1.62
CCDC7-213ENST00000639290 ANKRD23Q86SG2 305 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 NUTM1Q86Y26 1132 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 FBXL6Q8N531 539 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 CD320Q9NPF0 282 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 PCDHB8Q9UN66 801 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 RTL9Q8NET4 1388 aa4.93□□□□□ -1.62
CCDC7-213ENST00000639290 ECM29Q5VYK3 1845 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 LAMA3Q16787 3333 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 ADRB1P08588 477 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 IGFBP4P22692 258 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 CCDC85BQ15834 202 aaPredicted RBP4.92□□□□□ -1.62
CCDC7-213ENST00000639290 PLEKHO1Q53GL0 409 aaPredicted RBP4.92□□□□□ -1.62
CCDC7-213ENST00000639290 RASIP1Q5U651 963 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 RSBN1LQ6PCB5 846 aaPredicted RBP4.92□□□□□ -1.62
CCDC7-213ENST00000639290 PIK3R5Q8WYR1 880 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 OCEL1Q9H607 264 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 OTOFQ9HC10 1997 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 MYO3BQ8WXR4 1341 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 SALL1Q9NSC2 1324 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 COL4A1P02462 1669 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 KRT38O76015 456 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 USP17L8P0C7I0 530 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 SLC5A1P13866 664 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 EPHA10Q5JZY3 1008 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 ZGPATQ8N5A5 531 aaKnown RBP4.92□□□□□ -1.62
CCDC7-213ENST00000639290 BORCS6Q96GS4 357 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 CHAMP1Q96JM3 812 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 GMLQ99445 158 aa4.92□□□□□ -1.62
CCDC7-213ENST00000639290 ASTN2O75129 1339 aaPredicted RBP4.92□□□□□ -1.62
CCDC7-213ENST00000639290 TAF4O00268 1085 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms