RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 FBXL16Q8N461 479 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 NCOA5Q9HCD5 579 aaKnown RBP12.73□□□□□ -0.37
TARDBP-230ENST00000639083 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 LAMA4Q16363 1823 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 SERPINB2P05120 415 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 HIBADHP31937 336 aaKnown RBP12.73□□□□□ -0.37
TARDBP-230ENST00000639083 ANTXR2P58335 489 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 TRDNQ13061 729 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 ALX1Q15699 326 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 TXNRD3Q86VQ6 643 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 GAS2L3Q86XJ1 694 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
TARDBP-230ENST00000639083 COL1A1P02452 1464 aaPredicted RBP12.73□□□□□ -0.37
TARDBP-230ENST00000639083 BRWD3Q6RI45 1802 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 GADD45BO75293 160 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-230ENST00000639083 PDIA4P13667 645 aaKnown RBP12.72□□□□□ -0.37
TARDBP-230ENST00000639083 GRAPQ13588 217 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 L1TD1Q5T7N2 865 aaKnown RBP12.72□□□□□ -0.37
TARDBP-230ENST00000639083 FERMT3Q86UX7 667 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-230ENST00000639083 NAPBQ9H115 298 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 RBM27Q9P2N5 1060 aaKnown RBP12.72□□□□□ -0.37
TARDBP-230ENST00000639083 SLC4A4Q9Y6R1 1079 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 CASZ1Q86V15 1759 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 CTDNEP1O95476 244 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 EVCP57679 992 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
TARDBP-230ENST00000639083 ZNF772Q68DY9 489 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-230ENST00000639083 NSUN7Q8NE18 718 aaKnown RBP12.72□□□□□ -0.37
TARDBP-230ENST00000639083 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
TARDBP-230ENST00000639083 PNPLA7Q6ZV29 1317 aa12.71□□□□□ -0.37
TARDBP-230ENST00000639083 PPFIA3O75145 1194 aa12.71□□□□□ -0.37
TARDBP-230ENST00000639083 GNAT2P19087 354 aa12.71□□□□□ -0.37
TARDBP-230ENST00000639083 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
TARDBP-230ENST00000639083 LLPHQ9BRT6 129 aaKnown RBP12.71□□□□□ -0.37
TARDBP-230ENST00000639083 BRPF3Q9ULD4 1205 aa12.71□□□□□ -0.37
TARDBP-230ENST00000639083 B4E1Z4 1266 aa12.71□□□□□ -0.38
TARDBP-230ENST00000639083 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.38
TARDBP-230ENST00000639083 CTDSPL2Q05D32 466 aa12.71□□□□□ -0.38
TARDBP-230ENST00000639083 ZSCAN23Q3MJ62 389 aa12.71□□□□□ -0.38
TARDBP-230ENST00000639083 CYB5R4Q7L1T6 521 aa12.71□□□□□ -0.38
TARDBP-230ENST00000639083 FAM184AQ8NB25 1140 aa12.71□□□□□ -0.38
TARDBP-230ENST00000639083 RPGRQ92834 1020 aaKnown RBP12.71□□□□□ -0.38
TARDBP-230ENST00000639083 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
TARDBP-230ENST00000639083 DOCK2Q92608 1830 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 SEMA3EO15041 775 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 FIBPO43427 364 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 MBD3O95983 291 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 TDO2P48775 406 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 ST5P78524 1137 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 DDR1Q08345 913 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 FAM173BQ6P4H8 233 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 ZNF384Q8TF68 577 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 NACAP1Q9BZK3 213 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 TMEM63CQ9P1W3 806 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
TARDBP-230ENST00000639083 ZMYM6O95789 1325 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 NEDD4P46934 1319 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 MAGEB6P1A0A0J9YX57 407 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 KLF18A0A0U1RQI7 1052 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 PTPDC1A2A3K4 754 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 APBA3O96018 575 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 CHAF1AQ13111 956 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-230ENST00000639083 CRY2Q49AN0 593 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 TACC3Q9Y6A5 838 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 WDR19Q8NEZ3 1342 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 NAA16Q6N069 864 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-230ENST00000639083 RAB11FIP4Q86YS3 637 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 SDR42E1Q8WUS8 393 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 JAG2Q9Y219 1238 aa12.69□□□□□ -0.38
TARDBP-230ENST00000639083 IRS2Q9Y4H2 1338 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 H3BQV1 296 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
TARDBP-230ENST00000639083 PLSCR1O15162 318 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 MRE11P49959 708 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 DYNLL1P63167 89 aaKnown RBP12.68□□□□□ -0.38
TARDBP-230ENST00000639083 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
TARDBP-230ENST00000639083 ZNF827Q17R98 1081 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 IFFO2Q5TF58 517 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 STK11IPQ8N1F8 1099 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 RIOK1Q9BRS2 568 aaKnown RBP12.68□□□□□ -0.38
TARDBP-230ENST00000639083 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 HPS5Q9UPZ3 1129 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 LEMD3Q9Y2U8 911 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 GOLGA8BA8MQT2 603 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 PRDX5P30044 214 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 MECOMQ03112 1051 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 AKNAD1Q5T1N1 836 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 NSUN4Q96CB9 384 aaKnown RBP12.68□□□□□ -0.38
TARDBP-230ENST00000639083 ZSWIM5Q9P217 1185 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms