RNA–Protein interactions for RNA: ENST00000638786.1

ATM-227, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-227ENST00000638786 PIK3R2O00459 728 aa9.68□□□□□ -0.86
ATM-227ENST00000638786 PHACTR2O75167 634 aa9.68□□□□□ -0.86
ATM-227ENST00000638786 HOXD8P13378 290 aaPredicted RBP9.68□□□□□ -0.86
ATM-227ENST00000638786 IRS1P35568 1242 aa9.68□□□□□ -0.86
ATM-227ENST00000638786 NCAPG2Q86XI2 1143 aa9.68□□□□□ -0.86
ATM-227ENST00000638786 PMEPA1Q969W9 287 aa9.68□□□□□ -0.86
ATM-227ENST00000638786 SMG9Q9H0W8 520 aaKnown RBP9.68□□□□□ -0.86
ATM-227ENST00000638786 KANSL3Q9P2N6 904 aa9.68□□□□□ -0.86
ATM-227ENST00000638786 DCTN4Q9UJW0 460 aa9.68□□□□□ -0.86
ATM-227ENST00000638786 RRBP1Q9P2E9 1410 aaKnown RBP9.67□□□□□ -0.86
ATM-227ENST00000638786 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
ATM-227ENST00000638786 GNB5O14775 395 aa9.67□□□□□ -0.86
ATM-227ENST00000638786 MAPK1P28482 360 aa9.67□□□□□ -0.86
ATM-227ENST00000638786 SNX29Q8TEQ0 813 aa9.67□□□□□ -0.86
ATM-227ENST00000638786 LPIN3Q9BQK8 851 aa9.67□□□□□ -0.86
ATM-227ENST00000638786 ANKRD50Q9ULJ7 1429 aa9.66□□□□□ -0.86
ATM-227ENST00000638786 PLD4Q96BZ4 506 aa9.66□□□□□ -0.86
ATM-227ENST00000638786 FRRS1LQ9P0K9 344 aa9.66□□□□□ -0.86
ATM-227ENST00000638786 CAMSAP1Q5T5Y3 1602 aa9.66□□□□□ -0.86
ATM-227ENST00000638786 MYO3AQ8NEV4 1616 aa9.66□□□□□ -0.86
ATM-227ENST00000638786 NPATQ14207 1427 aa9.65□□□□□ -0.86
ATM-227ENST00000638786 TNRQ92752 1358 aa9.65□□□□□ -0.86
ATM-227ENST00000638786 DEPDC5O75140 1603 aa9.65□□□□□ -0.86
ATM-227ENST00000638786 FAM129BQ96TA1 746 aa9.65□□□□□ -0.86
ATM-227ENST00000638786 RBCK1Q9BYM8 510 aa9.65□□□□□ -0.86
ATM-227ENST00000638786 CHRDQ9H2X0 955 aa9.65□□□□□ -0.86
ATM-227ENST00000638786 PRDM6Q9NQX0 595 aa9.65□□□□□ -0.86
ATM-227ENST00000638786 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.65□□□□□ -0.86
ATM-227ENST00000638786 STRCQ7RTU9 1775 aa9.65□□□□□ -0.87
ATM-227ENST00000638786 PZPP20742 1482 aa9.65□□□□□ -0.87
ATM-227ENST00000638786 EREGO14944 169 aa9.64□□□□□ -0.87
ATM-227ENST00000638786 NEFLP07196 543 aa9.64□□□□□ -0.87
ATM-227ENST00000638786 AFF1P51825 1210 aaKnown RBP9.64□□□□□ -0.87
ATM-227ENST00000638786 PLVAPQ9BX97 442 aa9.64□□□□□ -0.87
ATM-227ENST00000638786 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
ATM-227ENST00000638786 SUV39H2Q9H5I1 410 aa9.64□□□□□ -0.87
ATM-227ENST00000638786 ZFYVE28Q9HCC9 887 aa9.64□□□□□ -0.87
ATM-227ENST00000638786 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
ATM-227ENST00000638786 PRDM15P57071 1507 aaPredicted RBP9.64□□□□□ -0.87
ATM-227ENST00000638786 ZC3H13Q5T200 1668 aaKnown RBP9.64□□□□□ -0.87
ATM-227ENST00000638786 KANK1Q14678 1352 aa9.63□□□□□ -0.87
ATM-227ENST00000638786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATM-227ENST00000638786 KIF4AO95239 1232 aa9.63□□□□□ -0.87
ATM-227ENST00000638786 TRIM11Q96F44 468 aa9.63□□□□□ -0.87
ATM-227ENST00000638786 DMRTB1Q96MA1 342 aa9.63□□□□□ -0.87
ATM-227ENST00000638786 CEP170BQ9Y4F5 1589 aaPredicted RBP9.63□□□□□ -0.87
ATM-227ENST00000638786 ROCK1Q13464 1354 aa9.63□□□□□ -0.87
ATM-227ENST00000638786 ATP11AP98196 1134 aa9.62□□□□□ -0.87
ATM-227ENST00000638786 KCNMA1Q12791 1236 aa9.62□□□□□ -0.87
ATM-227ENST00000638786 COL9A3Q14050 684 aaPredicted RBP9.62□□□□□ -0.87
ATM-227ENST00000638786 TRAPPC3LQ5T215 181 aa9.62□□□□□ -0.87
ATM-227ENST00000638786 GDF6Q6KF10 455 aaPredicted RBP9.62□□□□□ -0.87
ATM-227ENST00000638786 TMC7Q7Z402 723 aa9.62□□□□□ -0.87
ATM-227ENST00000638786 CEP120Q8N960 986 aa9.62□□□□□ -0.87
ATM-227ENST00000638786 TTC9Q92623 222 aa9.62□□□□□ -0.87
ATM-227ENST00000638786 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
ATM-227ENST00000638786 RASSF4Q9H2L5 321 aa9.62□□□□□ -0.87
ATM-227ENST00000638786 NOP53Q9NZM5 478 aaKnown RBP9.62□□□□□ -0.87
ATM-227ENST00000638786 AMOTL2Q9Y2J4 779 aa9.62□□□□□ -0.87
ATM-227ENST00000638786 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
ATM-227ENST00000638786 GPR182O15218 404 aa9.61□□□□□ -0.87
ATM-227ENST00000638786 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
ATM-227ENST00000638786 NID1P14543 1247 aa9.61□□□□□ -0.87
ATM-227ENST00000638786 ORC1Q13415 861 aa9.61□□□□□ -0.87
ATM-227ENST00000638786 CEP135Q66GS9 1140 aa9.61□□□□□ -0.87
ATM-227ENST00000638786 SND1Q7KZF4 910 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATM-227ENST00000638786 VWDEQ8N2E2 1590 aa9.61□□□□□ -0.87
ATM-227ENST00000638786 FAM135AQ9P2D6 1515 aa9.61□□□□□ -0.87
ATM-227ENST00000638786 ZNF142P52746 1687 aaPredicted RBP9.61□□□□□ -0.87
ATM-227ENST00000638786 A2ML1A8K2U0 1454 aa9.6□□□□□ -0.87
ATM-227ENST00000638786 SPDYE3A6NKU9 549 aa9.6□□□□□ -0.87
ATM-227ENST00000638786 SMNDC1O75940 238 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATM-227ENST00000638786 RASSF7Q02833 373 aa9.6□□□□□ -0.87
ATM-227ENST00000638786 GRIK5Q16478 980 aa9.6□□□□□ -0.87
ATM-227ENST00000638786 ZSCAN29Q8IWY8 852 aaPredicted RBP9.6□□□□□ -0.87
ATM-227ENST00000638786 DMRTC2Q8IXT2 367 aaPredicted RBP9.6□□□□□ -0.87
ATM-227ENST00000638786 PBX4Q9BYU1 374 aa9.6□□□□□ -0.87
ATM-227ENST00000638786 NUP155O75694 1391 aa9.6□□□□□ -0.87
ATM-227ENST00000638786 UNC13BO14795 1591 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 SPATA31D1Q6ZQQ2 1576 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 NAIPQ13075 1403 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 IGHA2P01877 340 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 EDN3P14138 238 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 ACPPP15309 386 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 MSL1Q68DK7 614 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 WFDC8Q8IUA0 241 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 TRIM33Q9UPN9 1127 aa9.59□□□□□ -0.87
ATM-227ENST00000638786 EFCAB6Q5THR3 1501 aa9.58□□□□□ -0.88
ATM-227ENST00000638786 CPNE3O75131 537 aaKnown RBP9.58□□□□□ -0.88
ATM-227ENST00000638786 TRPA1O75762 1119 aa9.58□□□□□ -0.88
ATM-227ENST00000638786 COL8A1P27658 744 aa9.58□□□□□ -0.88
ATM-227ENST00000638786 PLCB3Q01970 1234 aa9.58□□□□□ -0.88
ATM-227ENST00000638786 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
ATM-227ENST00000638786 USPL1Q5W0Q7 1092 aa9.58□□□□□ -0.88
ATM-227ENST00000638786 LACRTQ9GZZ8 138 aa9.58□□□□□ -0.88
ATM-227ENST00000638786 ARHGAP31Q2M1Z3 1444 aa9.57□□□□□ -0.88
ATM-227ENST00000638786 LMTK2Q8IWU2 1503 aa9.57□□□□□ -0.88
ATM-227ENST00000638786 GDF11O95390 407 aa9.57□□□□□ -0.88
ATM-227ENST00000638786 IDI1Q13907 227 aa9.57□□□□□ -0.88
ATM-227ENST00000638786 TMEM151AQ8N4L1 468 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms