RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CSRNP1Q96S65 589 aa23.57■■□□□ 1.36
CLN6-221ENST00000637494 SUGT1Q9Y2Z0 365 aa23.57■■□□□ 1.36
CLN6-221ENST00000637494 ZKSCAN2Q63HK3 967 aa23.56■■□□□ 1.36
CLN6-221ENST00000637494 WDR66Q8TBY9 1149 aa23.56■■□□□ 1.36
CLN6-221ENST00000637494 TEKT1Q969V4 418 aa23.56■■□□□ 1.36
CLN6-221ENST00000637494 TDRD3Q9H7E2 651 aaKnown RBP23.56■■□□□ 1.36
CLN6-221ENST00000637494 ZNF70Q9UC06 446 aaPredicted RBP23.56■■□□□ 1.36
CLN6-221ENST00000637494 SRGAP3O43295 1099 aa23.55■■□□□ 1.36
CLN6-221ENST00000637494 TRPA1O75762 1119 aa23.55■■□□□ 1.36
CLN6-221ENST00000637494 SPDYE2Q495Y8 402 aa23.55■■□□□ 1.36
CLN6-221ENST00000637494 CLUAP1Q96AJ1 413 aa23.55■■□□□ 1.36
CLN6-221ENST00000637494 COPRSQ9NQ92 184 aa23.55■■□□□ 1.36
CLN6-221ENST00000637494 RNF186Q9NXI6 227 aa23.55■■□□□ 1.36
CLN6-221ENST00000637494 RASA3Q14644 834 aa23.54■■□□□ 1.36
CLN6-221ENST00000637494 SLC10A4Q96EP9 437 aa23.54■■□□□ 1.36
CLN6-221ENST00000637494 TMOD2Q9NZR1 351 aa23.54■■□□□ 1.36
CLN6-221ENST00000637494 PA2G4Q9UQ80 394 aaKnown RBP23.54■■□□□ 1.36
CLN6-221ENST00000637494 GNAI2P04899 355 aa23.53■■□□□ 1.36
CLN6-221ENST00000637494 IREB2P48200 963 aaKnown RBP23.53■■□□□ 1.36
CLN6-221ENST00000637494 SREBF2Q12772 1141 aa23.53■■□□□ 1.36
CLN6-221ENST00000637494 MRIQ9BWK5 157 aa23.53■■□□□ 1.36
CLN6-221ENST00000637494 AKAP11Q9UKA4 1901 aa23.53■■□□□ 1.36
CLN6-221ENST00000637494 UNCXA6NJT0 531 aa23.52■■□□□ 1.36
CLN6-221ENST00000637494 MAP3K11Q16584 847 aa23.52■■□□□ 1.36
CLN6-221ENST00000637494 LDLRAD1Q5T700 205 aa23.52■■□□□ 1.36
CLN6-221ENST00000637494 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.52■■□□□ 1.36
CLN6-221ENST00000637494 AKAP2Q9Y2D5 859 aa23.52■■□□□ 1.36
CLN6-221ENST00000637494 TCP10L2B9ZVM9 353 aa23.51■■□□□ 1.35
CLN6-221ENST00000637494 MKRN3Q13064 507 aaKnown RBP23.51■■□□□ 1.35
CLN6-221ENST00000637494 MTX1Q13505 466 aa23.51■■□□□ 1.35
CLN6-221ENST00000637494 NBPF12Q5TAG4 269 aaPredicted RBP23.51■■□□□ 1.35
CLN6-221ENST00000637494 FTSJ3Q8IY81 847 aaKnown RBP23.51■■□□□ 1.35
CLN6-221ENST00000637494 DENND2AQ9ULE3 1009 aa23.51■■□□□ 1.35
CLN6-221ENST00000637494 SEMA3EO15041 775 aa23.5■■□□□ 1.35
CLN6-221ENST00000637494 GRIK5Q16478 980 aa23.5■■□□□ 1.35
CLN6-221ENST00000637494 ZDHHC15Q96MV8 337 aa23.5■■□□□ 1.35
CLN6-221ENST00000637494 AOX1Q06278 1338 aa23.5■■□□□ 1.35
CLN6-221ENST00000637494 ZBED9Q6R2W3 1325 aa23.5■■□□□ 1.35
CLN6-221ENST00000637494 MYH13Q9UKX3 1938 aa23.49■■□□□ 1.35
CLN6-221ENST00000637494 ABHD8Q96I13 439 aa23.49■■□□□ 1.35
CLN6-221ENST00000637494 FZD1Q9UP38 647 aa23.49■■□□□ 1.35
CLN6-221ENST00000637494 TM4SF4P48230 202 aa23.48■■□□□ 1.35
CLN6-221ENST00000637494 SPRYD7Q5W111 196 aa23.48■■□□□ 1.35
CLN6-221ENST00000637494 HHIPL2Q6UWX4 724 aa23.48■■□□□ 1.35
CLN6-221ENST00000637494 ANKRD13AQ8IZ07 590 aa23.48■■□□□ 1.35
CLN6-221ENST00000637494 TNNQ9UQP3 1299 aa23.48■■□□□ 1.35
CLN6-221ENST00000637494 LDHBP07195 334 aaKnown RBP23.47■■□□□ 1.35
CLN6-221ENST00000637494 ZBTB48P10074 688 aaPredicted RBP23.47■■□□□ 1.35
CLN6-221ENST00000637494 DGKZQ13574 1117 aa23.47■■□□□ 1.35
CLN6-221ENST00000637494 ZGPATQ8N5A5 531 aaKnown RBP23.47■■□□□ 1.35
CLN6-221ENST00000637494 TMEM57Q8N5G2 664 aa23.47■■□□□ 1.35
CLN6-221ENST00000637494 HOOK2Q96ED9 719 aa23.47■■□□□ 1.35
CLN6-221ENST00000637494 SSC5DA1L4H1 1573 aa23.47■■□□□ 1.35
CLN6-221ENST00000637494 MANSC4A6NHS7 340 aaPredicted RBP23.46■■□□□ 1.35
CLN6-221ENST00000637494 INHBEP58166 350 aa23.46■■□□□ 1.35
CLN6-221ENST00000637494 G3BP1Q13283 466 aaKnown RBP eCLIP23.46■■□□□ 1.35
CLN6-221ENST00000637494 USP2O75604 605 aaPredicted RBP23.45■■□□□ 1.34
CLN6-221ENST00000637494 PHKA1P46020 1223 aa23.45■■□□□ 1.34
CLN6-221ENST00000637494 TFCP2Q12800 502 aa23.45■■□□□ 1.34
CLN6-221ENST00000637494 MVPQ14764 893 aaKnown RBP23.45■■□□□ 1.34
CLN6-221ENST00000637494 FKBP1CQ5VVH2 108 aa23.45■■□□□ 1.34
CLN6-221ENST00000637494 CCDC102BQ68D86 513 aa23.45■■□□□ 1.34
CLN6-221ENST00000637494 TMEM39BQ9GZU3 492 aa23.45■■□□□ 1.34
CLN6-221ENST00000637494 SALL1Q9NSC2 1324 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 CASP8AP2Q9UKL3 1982 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 A0A1B0GUL7 405 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 ALDH1A1P00352 501 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 TIMM10P62072 90 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 GORABQ5T7V8 394 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 WNK4Q96J92 1243 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 CLMNQ96JQ2 1002 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 NEUROD6Q96NK8 337 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 MCOLN1Q9GZU1 580 aa23.44■■□□□ 1.34
CLN6-221ENST00000637494 CACNB3P54284 484 aa23.43■■□□□ 1.34
CLN6-221ENST00000637494 APOBEC3HQ6NTF7 200 aaKnown RBP23.43■■□□□ 1.34
CLN6-221ENST00000637494 FAM83AQ86UY5 434 aa23.43■■□□□ 1.34
CLN6-221ENST00000637494 ITPRIPQ8IWB1 547 aa23.43■■□□□ 1.34
CLN6-221ENST00000637494 TEPSINQ96N21 525 aa23.43■■□□□ 1.34
CLN6-221ENST00000637494 ZBTB22O15209 634 aa23.42■■□□□ 1.34
CLN6-221ENST00000637494 ADORA1P30542 326 aa23.42■■□□□ 1.34
CLN6-221ENST00000637494 SLF2Q8IX21 1173 aa23.42■■□□□ 1.34
CLN6-221ENST00000637494 XAGE2Q96GT9 111 aa23.42■■□□□ 1.34
CLN6-221ENST00000637494 CSADQ9Y600 493 aa23.42■■□□□ 1.34
CLN6-221ENST00000637494 CCDC85CA6NKD9 419 aa23.41■■□□□ 1.34
CLN6-221ENST00000637494 TBC1D8O95759 1140 aa23.41■■□□□ 1.34
CLN6-221ENST00000637494 PRDX5P30044 214 aa23.41■■□□□ 1.34
CLN6-221ENST00000637494 OS9Q13438 667 aaPredicted RBP23.41■■□□□ 1.34
CLN6-221ENST00000637494 SPTY2D1Q68D10 685 aaPredicted RBP23.41■■□□□ 1.34
CLN6-221ENST00000637494 OTUD7BQ6GQQ9 843 aa23.41■■□□□ 1.34
CLN6-221ENST00000637494 PDS5AQ29RF7 1337 aaKnown RBP23.4■■□□□ 1.34
CLN6-221ENST00000637494 PNMA6EA0A0J9YXQ4 647 aa23.4■■□□□ 1.34
CLN6-221ENST00000637494 DCAF15Q66K64 600 aa23.4■■□□□ 1.34
CLN6-221ENST00000637494 DZIP1Q86YF9 867 aaKnown RBP23.4■■□□□ 1.34
CLN6-221ENST00000637494 ELP3Q9H9T3 547 aa23.4■■□□□ 1.34
CLN6-221ENST00000637494 DAGLAQ9Y4D2 1042 aa23.4■■□□□ 1.34
CLN6-221ENST00000637494 MS4A1P11836 297 aa23.39■■□□□ 1.33
CLN6-221ENST00000637494 MAP3K9P80192 1104 aa23.39■■□□□ 1.33
CLN6-221ENST00000637494 DIXDC1Q155Q3 683 aa23.39■■□□□ 1.33
CLN6-221ENST00000637494 ABCF2Q9UG63 623 aa23.39■■□□□ 1.33
CLN6-221ENST00000637494 RASGRF1Q13972 1273 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms