RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 VPS37DQ86XT2 251 aa15.78■□□□□ 0.12
CTSD-208ENST00000636843 DZIP1LQ8IYY4 767 aaKnown RBP15.78■□□□□ 0.12
CTSD-208ENST00000636843 ANKRD13AQ8IZ07 590 aa15.78■□□□□ 0.12
CTSD-208ENST00000636843 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
CTSD-208ENST00000636843 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
CTSD-208ENST00000636843 ECM29Q5VYK3 1845 aa15.78■□□□□ 0.12
CTSD-208ENST00000636843 PDE4DIPQ5VU43 2346 aa15.78■□□□□ 0.12
CTSD-208ENST00000636843 PTPRCP08575 1304 aa15.78■□□□□ 0.12
CTSD-208ENST00000636843 OTUD7BQ6GQQ9 843 aa15.78■□□□□ 0.12
CTSD-208ENST00000636843 TRMT2AQ8IZ69 625 aaKnown RBP15.78■□□□□ 0.12
CTSD-208ENST00000636843 TDRD3Q9H7E2 651 aaKnown RBP15.78■□□□□ 0.12
CTSD-208ENST00000636843 IGF2BP3O00425 579 aaKnown RBP eCLIP15.77■□□□□ 0.11
CTSD-208ENST00000636843 CRKP46108 304 aa15.77■□□□□ 0.11
CTSD-208ENST00000636843 HDLBPQ00341 1268 aaKnown RBP15.77■□□□□ 0.11
CTSD-208ENST00000636843 CAVIN4Q5BKX8 364 aa15.77■□□□□ 0.11
CTSD-208ENST00000636843 METTL24Q5JXM2 366 aa15.77■□□□□ 0.11
CTSD-208ENST00000636843 ANKRD44Q8N8A2 993 aa15.77■□□□□ 0.11
CTSD-208ENST00000636843 TBC1D22AQ8WUA7 517 aa15.77■□□□□ 0.11
CTSD-208ENST00000636843 E9PSI1 815 aa15.76■□□□□ 0.11
CTSD-208ENST00000636843 TNNI2P48788 182 aa15.76■□□□□ 0.11
CTSD-208ENST00000636843 LRRC24Q50LG9 513 aa15.76■□□□□ 0.11
CTSD-208ENST00000636843 TESPA1A2RU30 521 aaPredicted RBP15.75■□□□□ 0.11
CTSD-208ENST00000636843 FRAT2O75474 233 aaPredicted RBP15.75■□□□□ 0.11
CTSD-208ENST00000636843 GJA5P36382 358 aa15.75■□□□□ 0.11
CTSD-208ENST00000636843 B4GALNT3Q6L9W6 998 aa15.75■□□□□ 0.11
CTSD-208ENST00000636843 TNRC18O15417 2968 aaPredicted RBP15.74■□□□□ 0.11
CTSD-208ENST00000636843 PDE8BO95263 885 aa15.74■□□□□ 0.11
CTSD-208ENST00000636843 CHAF1AQ13111 956 aaPredicted RBP15.74■□□□□ 0.11
CTSD-208ENST00000636843 VGLL2Q8N8G2 317 aa15.74■□□□□ 0.11
CTSD-208ENST00000636843 TEPSINQ96N21 525 aa15.74■□□□□ 0.11
CTSD-208ENST00000636843 MRIQ9BWK5 157 aa15.74■□□□□ 0.11
CTSD-208ENST00000636843 KIF16BQ96L93 1317 aa15.74■□□□□ 0.11
CTSD-208ENST00000636843 TCP10L2B9ZVM9 353 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 OTOP1Q7RTM1 612 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 OPTNQ96CV9 577 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 ERO1AQ96HE7 468 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 ELP3Q9H9T3 547 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 IQSEC3Q9UPP2 1182 aaPredicted RBP15.73■□□□□ 0.11
CTSD-208ENST00000636843 TRIM17Q9Y577 477 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 IFIT1P09914 478 aaKnown RBP15.73■□□□□ 0.11
CTSD-208ENST00000636843 MAP3K9P80192 1104 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 GRIK5Q16478 980 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 TEKT1Q969V4 418 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 CCDC136Q96JN2 1154 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 TMEM39BQ9GZU3 492 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 SUGT1Q9Y2Z0 365 aa15.73■□□□□ 0.11
CTSD-208ENST00000636843 BCAMP50895 628 aa15.72■□□□□ 0.11
CTSD-208ENST00000636843 CRHR2Q13324 411 aa15.72■□□□□ 0.11
CTSD-208ENST00000636843 PUM3Q15397 648 aaKnown RBP15.72■□□□□ 0.11
CTSD-208ENST00000636843 PRPF38BQ5VTL8 546 aaKnown RBP15.72■□□□□ 0.11
CTSD-208ENST00000636843 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.72■□□□□ 0.11
CTSD-208ENST00000636843 MS4A4AQ96JQ5 239 aa15.72■□□□□ 0.11
CTSD-208ENST00000636843 PTPN18Q99952 460 aa15.72■□□□□ 0.11
CTSD-208ENST00000636843 CSADQ9Y600 493 aa15.72■□□□□ 0.11
CTSD-208ENST00000636843 MAST3O60307 1309 aa15.71■□□□□ 0.11
CTSD-208ENST00000636843 FGFR2P21802 821 aa15.71■□□□□ 0.11
CTSD-208ENST00000636843 ALDH1L2Q3SY69 923 aa15.71■□□□□ 0.11
CTSD-208ENST00000636843 FKBP1CQ5VVH2 108 aa15.71■□□□□ 0.11
CTSD-208ENST00000636843 INTS3Q68E01 1043 aaKnown RBP15.71■□□□□ 0.11
CTSD-208ENST00000636843 CDAN1Q8IWY9 1227 aa15.71■□□□□ 0.11
CTSD-208ENST00000636843 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
CTSD-208ENST00000636843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.71■□□□□ 0.113e-12■□□□□ 10.8
CTSD-208ENST00000636843 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
CTSD-208ENST00000636843 ZDHHC15Q96MV8 337 aa15.71■□□□□ 0.11
CTSD-208ENST00000636843 TMOD2Q9NZR1 351 aa15.71■□□□□ 0.11
CTSD-208ENST00000636843 LAMB1P07942 1786 aa15.7■□□□□ 0.1
CTSD-208ENST00000636843 ARAP2Q8WZ64 1704 aa15.7■□□□□ 0.1
CTSD-208ENST00000636843 GTF2A2P52657 109 aa15.7■□□□□ 0.1
CTSD-208ENST00000636843 SP3Q02447 781 aa15.7■□□□□ 0.1
CTSD-208ENST00000636843 VGLL4Q14135 290 aa15.7■□□□□ 0.1
CTSD-208ENST00000636843 HOOK2Q96ED9 719 aa15.7■□□□□ 0.1
CTSD-208ENST00000636843 EYA2O00167 538 aa15.69■□□□□ 0.1
CTSD-208ENST00000636843 SLC5A1P13866 664 aa15.69■□□□□ 0.1
CTSD-208ENST00000636843 HHIPL2Q6UWX4 724 aa15.69■□□□□ 0.1
CTSD-208ENST00000636843 FAM83AQ86UY5 434 aa15.69■□□□□ 0.1
CTSD-208ENST00000636843 CD99L2Q8TCZ2 262 aa15.69■□□□□ 0.1
CTSD-208ENST00000636843 EFCC1Q9HA90 598 aa15.69■□□□□ 0.1
CTSD-208ENST00000636843 PTPN22Q9Y2R2 807 aa15.69■□□□□ 0.1
CTSD-208ENST00000636843 RFX5P48382 616 aaPredicted RBP15.68■□□□□ 0.1
CTSD-208ENST00000636843 ARHGEF6Q15052 776 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 APOBEC3HQ6NTF7 200 aaKnown RBP15.68■□□□□ 0.1
CTSD-208ENST00000636843 WDR66Q8TBY9 1149 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 BRI3BPQ8WY22 251 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 LPIN2Q92539 896 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 ZFYVE28Q9HCC9 887 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 CCL15-CCL14A0A0B4J2E2 113 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 CACNB3P54284 484 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 CCL15Q16663 113 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
CTSD-208ENST00000636843 SPDYE5A6NIY4 337 aa15.67■□□□□ 0.1
CTSD-208ENST00000636843 TAF1CQ15572 869 aaPredicted RBP15.67■□□□□ 0.1
CTSD-208ENST00000636843 EXOC6Q8TAG9 804 aa15.67■□□□□ 0.1
CTSD-208ENST00000636843 OTUD5Q96G74 571 aa15.67■□□□□ 0.1
CTSD-208ENST00000636843 SMC4Q9NTJ3 1288 aa15.67■□□□□ 0.1
CTSD-208ENST00000636843 WDHD1O75717 1129 aaPredicted RBP15.66■□□□□ 0.1
CTSD-208ENST00000636843 DCAF15Q66K64 600 aa15.66■□□□□ 0.1
CTSD-208ENST00000636843 ATG9AQ7Z3C6 839 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms