RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 IFNL1Q8IU54 200 aa20.1■□□□□ 0.81
CACNA1A-229ENST00000636670 C1orf115Q9H7X2 142 aa20.1■□□□□ 0.81
CACNA1A-229ENST00000636670 CENPFP49454 3210 aa20.1■□□□□ 0.81
CACNA1A-229ENST00000636670 MANSC4A6NHS7 340 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-229ENST00000636670 KLRK1P26718 216 aa20.09■□□□□ 0.81
CACNA1A-229ENST00000636670 C20orf194Q5TEA3 1177 aa20.09■□□□□ 0.81
CACNA1A-229ENST00000636670 ARMC9Q7Z3E5 817 aa20.09■□□□□ 0.81
CACNA1A-229ENST00000636670 PODNQ7Z5L7 613 aa20.09■□□□□ 0.81
CACNA1A-229ENST00000636670 COA1Q9GZY4 146 aa20.09■□□□□ 0.81
CACNA1A-229ENST00000636670 EFCC1Q9HA90 598 aa20.09■□□□□ 0.81
CACNA1A-229ENST00000636670 ECM29Q5VYK3 1845 aa20.09■□□□□ 0.81
CACNA1A-229ENST00000636670 PNMA6EA0A0J9YXQ4 647 aa20.08■□□□□ 0.81
CACNA1A-229ENST00000636670 WTIPA6NIX2 430 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-229ENST00000636670 PDE8BO95263 885 aa20.08■□□□□ 0.81
CACNA1A-229ENST00000636670 IL15P40933 162 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-229ENST00000636670 ATG9AQ7Z3C6 839 aa20.08■□□□□ 0.81
CACNA1A-229ENST00000636670 ZNF333Q96JL9 665 aa20.08■□□□□ 0.81
CACNA1A-229ENST00000636670 SIL1Q9H173 461 aa20.08■□□□□ 0.81
CACNA1A-229ENST00000636670 PA2G4Q9UQ80 394 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-229ENST00000636670 POLA2Q14181 598 aa20.07■□□□□ 0.8
CACNA1A-229ENST00000636670 PUM3Q15397 648 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-229ENST00000636670 ZNF804AQ7Z570 1209 aa20.07■□□□□ 0.8
CACNA1A-229ENST00000636670 TXNRD3Q86VQ6 643 aa20.07■□□□□ 0.8
CACNA1A-229ENST00000636670 CD99L2Q8TCZ2 262 aa20.07■□□□□ 0.8
CACNA1A-229ENST00000636670 SSH3Q8TE77 659 aa20.07■□□□□ 0.8
CACNA1A-229ENST00000636670 GMLQ99445 158 aa20.07■□□□□ 0.8
CACNA1A-229ENST00000636670 RBM27Q9P2N5 1060 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-229ENST00000636670 SNAP23O00161 211 aa20.06■□□□□ 0.8
CACNA1A-229ENST00000636670 MNX1P50219 401 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-229ENST00000636670 ATP8B2P98198 1209 aa20.06■□□□□ 0.8
CACNA1A-229ENST00000636670 LDLRAD1Q5T700 205 aa20.06■□□□□ 0.8
CACNA1A-229ENST00000636670 CEP85Q6P2H3 762 aa20.06■□□□□ 0.8
CACNA1A-229ENST00000636670 NBPF11Q86T75 865 aa20.06■□□□□ 0.8
CACNA1A-229ENST00000636670 ZBTB40Q9NUA8 1239 aa20.06■□□□□ 0.8
CACNA1A-229ENST00000636670 NBPF9Q3BBW0 867 aa20.05■□□□□ 0.8
CACNA1A-229ENST00000636670 FGFR2P21802 821 aa20.04■□□□□ 0.8
CACNA1A-229ENST00000636670 SLC4A8Q2Y0W8 1093 aa20.04■□□□□ 0.8
CACNA1A-229ENST00000636670 IFIT1P09914 478 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-229ENST00000636670 ZBTB48P10074 688 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-229ENST00000636670 SP3Q02447 781 aa20.03■□□□□ 0.8
CACNA1A-229ENST00000636670 PRKG1Q13976 671 aa20.03■□□□□ 0.8
CACNA1A-229ENST00000636670 CD209Q9NNX6 404 aa20.03■□□□□ 0.8
CACNA1A-229ENST00000636670 CEP126Q9P2H0 1117 aa20.03■□□□□ 0.8
CACNA1A-229ENST00000636670 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 USP17L3A6NCW0 530 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 USP17L4A6NCW7 530 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 IGF2BP3O00425 579 aaKnown RBP eCLIP20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 SLC5A1P13866 664 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 IL1R1P14778 569 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 ATP2B3Q16720 1220 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 OTUD7BQ6GQQ9 843 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 USP17L1Q7RTZ2 530 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 LPIN2Q92539 896 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 SLC10A4Q96EP9 437 aa20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 ANGEL1Q9UNK9 670 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-229ENST00000636670 WNT10BO00744 389 aa20.01■□□□□ 0.79
CACNA1A-229ENST00000636670 SLC9C1Q4G0N8 1177 aa20.01■□□□□ 0.79
CACNA1A-229ENST00000636670 STRIP1Q5VSL9 837 aa20.01■□□□□ 0.79
CACNA1A-229ENST00000636670 RPAP2Q8IXW5 612 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-229ENST00000636670 A0A0C4DFX4 3053 aa20.01■□□□□ 0.79
CACNA1A-229ENST00000636670 HMMRO75330 724 aa20■□□□□ 0.79
CACNA1A-229ENST00000636670 HIBADHP31937 336 aaKnown RBP20■□□□□ 0.79
CACNA1A-229ENST00000636670 G3BP1Q13283 466 aaKnown RBP eCLIP20■□□□□ 0.79
CACNA1A-229ENST00000636670 CRHR2Q13324 411 aa20■□□□□ 0.79
CACNA1A-229ENST00000636670 ARHGEF6Q15052 776 aa20■□□□□ 0.79
CACNA1A-229ENST00000636670 CAVIN4Q5BKX8 364 aa20■□□□□ 0.79
CACNA1A-229ENST00000636670 OGFOD1Q8N543 542 aa20■□□□□ 0.79
CACNA1A-229ENST00000636670 FAM84BQ96KN1 310 aaPredicted RBP20■□□□□ 0.79
CACNA1A-229ENST00000636670 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
CACNA1A-229ENST00000636670 GYG1P46976 350 aa19.99■□□□□ 0.79
CACNA1A-229ENST00000636670 DACT2Q5SW24 774 aa19.99■□□□□ 0.79
CACNA1A-229ENST00000636670 DPF3Q92784 378 aa19.99■□□□□ 0.79
CACNA1A-229ENST00000636670 AKAP2Q9Y2D5 859 aa19.99■□□□□ 0.79
CACNA1A-229ENST00000636670 MAST2Q6P0Q8 1798 aa19.98■□□□□ 0.79
CACNA1A-229ENST00000636670 RANBP2P49792 3224 aaKnown RBP19.98■□□□□ 0.79
CACNA1A-229ENST00000636670 FBXO33Q7Z6M2 555 aa19.98■□□□□ 0.79
CACNA1A-229ENST00000636670 VPS37DQ86XT2 251 aa19.98■□□□□ 0.79
CACNA1A-229ENST00000636670 TDRD7Q8NHU6 1098 aaKnown RBP19.98■□□□□ 0.79
CACNA1A-229ENST00000636670 FAM205AQ6ZU69 1335 aa19.98■□□□□ 0.79
CACNA1A-229ENST00000636670 SURF6O75683 361 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 FKBP1AP62942 108 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 CAP1Q01518 475 aa19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 TFCP2Q12800 502 aa19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 OS9Q13438 667 aaPredicted RBP19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 MAP3K11Q16584 847 aa19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 FBXW7Q969H0 707 aa19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 WNK4Q96J92 1243 aa19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 PRO3102Q9H379 93 aa19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 COL1A1P02452 1464 aaPredicted RBP19.97■□□□□ 0.79
CACNA1A-229ENST00000636670 UNCXA6NJT0 531 aa19.96■□□□□ 0.79
CACNA1A-229ENST00000636670 ZBTB22O15209 634 aa19.96■□□□□ 0.79
CACNA1A-229ENST00000636670 MMP14P50281 582 aa19.96■□□□□ 0.79
CACNA1A-229ENST00000636670 GTF2IP78347 998 aa19.96■□□□□ 0.79
CACNA1A-229ENST00000636670 TTLL5Q6EMB2 1281 aa19.96■□□□□ 0.79
CACNA1A-229ENST00000636670 APOBEC3FQ8IUX4 373 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-229ENST00000636670 PTCH2Q9Y6C5 1203 aa19.96■□□□□ 0.79
CACNA1A-229ENST00000636670 COL6A3P12111 3177 aa19.95■□□□□ 0.78
CACNA1A-229ENST00000636670 A0A1B0GUL7 405 aa19.95■□□□□ 0.78
CACNA1A-229ENST00000636670 SASH1O94885 1247 aa19.95■□□□□ 0.78
CACNA1A-229ENST00000636670 HSP90AB4PQ58FF6 505 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms