RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 CARD11Q9BXL7 1154 aa7.91□□□□□ -1.14
CLN8-210ENST00000636605 UBE2OQ9C0C9 1292 aaKnown RBP7.91□□□□□ -1.14
CLN8-210ENST00000636605 DNAJB12Q9NXW2 375 aaKnown RBP7.91□□□□□ -1.14
CLN8-210ENST00000636605 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.91□□□□□ -1.14
CLN8-210ENST00000636605 CENPJQ9HC77 1338 aaPredicted RBP7.91□□□□□ -1.14
CLN8-210ENST00000636605 ANKARQ7Z5J8 1434 aa7.91□□□□□ -1.14
CLN8-210ENST00000636605 NALCNQ8IZF0 1738 aa7.91□□□□□ -1.14
CLN8-210ENST00000636605 GPRASP1Q5JY77 1395 aa7.9□□□□□ -1.14
CLN8-210ENST00000636605 JCADQ9P266 1359 aa7.9□□□□□ -1.14
CLN8-210ENST00000636605 LILRB5O75023 590 aa7.9□□□□□ -1.14
CLN8-210ENST00000636605 NFKB1P19838 968 aa7.9□□□□□ -1.14
CLN8-210ENST00000636605 GATA4P43694 442 aa7.9□□□□□ -1.14
CLN8-210ENST00000636605 IDH3AP50213 366 aa7.9□□□□□ -1.14
CLN8-210ENST00000636605 DGKZQ13574 1117 aa7.9□□□□□ -1.14
CLN8-210ENST00000636605 SAFB2Q14151 953 aaKnown RBP eCLIP7.9□□□□□ -1.14
CLN8-210ENST00000636605 AHDC1Q5TGY3 1603 aaPredicted RBP7.89□□□□□ -1.15
CLN8-210ENST00000636605 PLEKHH1Q9ULM0 1364 aa7.89□□□□□ -1.15
CLN8-210ENST00000636605 SPATA31A6Q5VVP1 1343 aa7.89□□□□□ -1.15
CLN8-210ENST00000636605 EVC2Q86UK5 1308 aa7.89□□□□□ -1.15
CLN8-210ENST00000636605 EPB42P16452 691 aa7.89□□□□□ -1.15
CLN8-210ENST00000636605 XP32Q5T750 250 aa7.89□□□□□ -1.15
CLN8-210ENST00000636605 FAM200AQ8TCP9 573 aa7.89□□□□□ -1.15
CLN8-210ENST00000636605 ADGRB2O60241 1585 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 ARSDP51689 593 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 AFF1P51825 1210 aaKnown RBP7.88□□□□□ -1.15
CLN8-210ENST00000636605 DOC2BQ14184 412 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 ELOAQ14241 798 aaKnown RBP7.88□□□□□ -1.15
CLN8-210ENST00000636605 ORAI2Q96SN7 254 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 ZFATQ9P243 1243 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 LRFN2Q9ULH4 789 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 ZMIZ1Q9ULJ6 1067 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 NOVA2Q9UNW9 492 aaKnown RBP7.88□□□□□ -1.15
CLN8-210ENST00000636605 PHLPP1O60346 1717 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 TRPM1Q7Z4N2 1603 aa7.88□□□□□ -1.15
CLN8-210ENST00000636605 RALGAPBQ86X10 1494 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 SBNO2Q9Y2G9 1366 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 A0A0A0MRY4 1105 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 MICAL2O94851 1124 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 APBA3O96018 575 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 SRPK2P78362 688 aaKnown RBP7.87□□□□□ -1.15
CLN8-210ENST00000636605 TRIM28Q13263 835 aaKnown RBP7.87□□□□□ -1.15
CLN8-210ENST00000636605 FKBP5Q13451 457 aaPredicted RBP7.87□□□□□ -1.15
CLN8-210ENST00000636605 OCLNQ16625 522 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 SWI5Q1ZZU3 235 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 RSPO4Q2I0M5 234 aaPredicted RBP7.87□□□□□ -1.15
CLN8-210ENST00000636605 NBPF8Q3BBV2 869 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 NKAPLQ5M9Q1 402 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 PNMA5Q96PV4 448 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 PUS7Q96PZ0 661 aaKnown RBP7.87□□□□□ -1.15
CLN8-210ENST00000636605 NACC1Q96RE7 527 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 HIRIP3Q9BW71 556 aaPredicted RBP7.87□□□□□ -1.15
CLN8-210ENST00000636605 CDK19Q9BWU1 502 aa7.87□□□□□ -1.15
CLN8-210ENST00000636605 JPH1Q9HDC5 661 aaPredicted RBP7.87□□□□□ -1.15
CLN8-210ENST00000636605 ARHGEF28Q8N1W1 1705 aaKnown RBP7.86□□□□□ -1.15
CLN8-210ENST00000636605 FMN2Q9NZ56 1722 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 KIF1AQ12756 1690 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 ELNP15502 786 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 TBC1D8BQ0IIM8 1120 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 C11orf91Q3C1V1 193 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 CDCA8Q53HL2 280 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 PSAPL1Q6NUJ1 521 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 NGDNQ8NEJ9 315 aaKnown RBP7.86□□□□□ -1.15
CLN8-210ENST00000636605 TRPM4Q8TD43 1214 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 NUDT16Q96DE0 195 aaKnown RBP7.86□□□□□ -1.15
CLN8-210ENST00000636605 TPSG1Q9NRR2 321 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 FRRS1LQ9P0K9 344 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 TULP4Q9NRJ4 1543 aa7.86□□□□□ -1.15
CLN8-210ENST00000636605 BRD4O60885 1362 aaPredicted RBP7.85□□□□□ -1.15
CLN8-210ENST00000636605 NHSL1Q5SYE7 1610 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 OPLAHO14841 1288 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 EGFRP00533 1210 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 SELPP16109 830 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 GRIK4Q16099 956 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 GRIK5Q16478 980 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 KRT28Q7Z3Y7 464 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 IFT43Q96FT9 208 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 LPIN3Q9BQK8 851 aa7.85□□□□□ -1.15
CLN8-210ENST00000636605 COL16A1Q07092 1604 aaPredicted RBP7.85□□□□□ -1.15
CLN8-210ENST00000636605 ARHGEF10O15013 1369 aa7.84□□□□□ -1.15
CLN8-210ENST00000636605 ZBTB42B2RXF5 422 aa7.84□□□□□ -1.15
CLN8-210ENST00000636605 GPLD1P80108 840 aa7.84□□□□□ -1.15
CLN8-210ENST00000636605 ADGRE1Q14246 886 aa7.84□□□□□ -1.15
CLN8-210ENST00000636605 PCSK7Q16549 785 aa7.84□□□□□ -1.15
CLN8-210ENST00000636605 MEX3CQ5U5Q3 659 aaKnown RBP7.84□□□□□ -1.15
CLN8-210ENST00000636605 DHX32Q7L7V1 743 aaKnown RBP7.84□□□□□ -1.15
CLN8-210ENST00000636605 NUDT8Q8WV74 236 aa7.84□□□□□ -1.15
CLN8-210ENST00000636605 IGFLR1Q9H665 355 aa7.84□□□□□ -1.15
CLN8-210ENST00000636605 SBNO1A3KN83 1393 aa7.84□□□□□ -1.16
CLN8-210ENST00000636605 RFX1P22670 979 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 TMF1P82094 1093 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 MBTPS1Q14703 1052 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 COX20Q5RI15 118 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 FAM35AQ86V20 835 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 FMR1NBQ8N0W7 255 aaPredicted RBP7.83□□□□□ -1.16
CLN8-210ENST00000636605 Q8N3U1 123 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 STK32AQ8WU08 396 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 COL26A1Q96A83 441 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 VTI1AQ96AJ9 217 aa7.83□□□□□ -1.16
CLN8-210ENST00000636605 SEMA6BQ9H3T3 888 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms