RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 BTG4Q9NY30 223 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 RSPH14Q9UHP6 348 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 LRRC27Q9C0I9 530 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 UQCRFS1P1P0C7P4 283 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 LRMPQ12912 555 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 PARD3BQ8TEW8 1205 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 NYXQ9GZU5 481 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 XRCC6P12956 609 aaKnown RBP eCLIP20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 RMND1Q9NWS8 449 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 EPRSP07814 1512 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 STRN3Q13033 797 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 TPTE2Q6XPS3 522 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 NEK11Q8NG66 645 aa20.09■□□□□ 0.81
CACNA1A-227ENST00000636549 CALML3P27482 149 aa20.08■□□□□ 0.81
CACNA1A-227ENST00000636549 KRT79Q5XKE5 535 aa20.08■□□□□ 0.81
CACNA1A-227ENST00000636549 PARP1P09874 1014 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-227ENST00000636549 TEX13AQ9BXU3 409 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-227ENST00000636549 KIF5AQ12840 1032 aa20.08■□□□□ 0.8
CACNA1A-227ENST00000636549 CCDC89Q8N998 374 aa20.08■□□□□ 0.8
CACNA1A-227ENST00000636549 RDH13Q8NBN7 331 aa20.08■□□□□ 0.8
CACNA1A-227ENST00000636549 PTPROQ16827 1216 aa20.08■□□□□ 0.8
CACNA1A-227ENST00000636549 CCDC14Q49A88 953 aa20.08■□□□□ 0.8
CACNA1A-227ENST00000636549 VPS52Q8N1B4 723 aa20.08■□□□□ 0.8
CACNA1A-227ENST00000636549 DACT3Q96B18 629 aaPredicted RBP20.08■□□□□ 0.8
CACNA1A-227ENST00000636549 TRIM31Q9BZY9 425 aa20.08■□□□□ 0.8
CACNA1A-227ENST00000636549 VWA3AA6NCI4 1184 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 TAF5LO75529 589 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 CWF19L2Q2TBE0 894 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 TBC1D10BQ4KMP7 808 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 TEX11Q8IYF3 940 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 ACEP12821 1306 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 NOL3O60936 208 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 SAT1P21673 171 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 TBC1D31Q96DN5 1066 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 PLVAPQ9BX97 442 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 SLC8A3P57103 927 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 AATFQ9NY61 560 aaKnown RBP eCLIP20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 FRMD4BQ9Y2L6 1034 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 MBIPQ9NS73 344 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 WASLO00401 505 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 PPP1R16BQ96T49 567 aa20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 CCNL1Q9UK58 526 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-227ENST00000636549 STX10O60499 249 aa20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 NSMFQ6X4W1 530 aa20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 hCG_1642624A0A1W2PR95 340 aa20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 TFCP2Q12800 502 aa20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 KIAA1107Q9UPP5 1409 aa20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 TBC1D9Q6ZT07 1266 aa20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 DNAI1Q9UI46 699 aa20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-227ENST00000636549 NMIQ13287 307 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 CCDC170Q8IYT3 715 aa20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 PRPF38AQ8NAV1 312 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 TACC3Q9Y6A5 838 aa20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 ZNF165P49910 485 aa20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 UTP14CQ5TAP6 766 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 CDCA7Q9BWT1 371 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 ARPP19P56211 112 aa20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 PPP2R5AQ15172 486 aa20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 CCDC129Q6ZRS4 1044 aa20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 PAG1Q9NWQ8 432 aa20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 MYO1AQ9UBC5 1043 aa20.05■□□□□ 0.8
CACNA1A-227ENST00000636549 SPDYE2BA6NHP3 402 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 ATP2A1O14983 1001 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 SPDYE6P0CI01 402 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 DNAJC25Q9H1X3 360 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 PRPF6O94906 941 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 INF2Q27J81 1249 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 CEP57Q86XR8 500 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 CNBD1Q8NA66 436 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 ARMT1Q9H993 441 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 CCDC110Q8TBZ0 833 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 CACYBPQ9HB71 228 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 GOLGA6L9A6NEM1 432 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 TCP10L2B9ZVM9 353 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 CYLC1P35663 651 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 BRDTQ58F21 947 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 ACRBPQ8NEB7 543 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 BACH2Q9BYV9 841 aa20.04■□□□□ 0.8
CACNA1A-227ENST00000636549 RYBPQ8N488 228 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 METTL14Q9HCE5 456 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 MKRN1Q9UHC7 482 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 ESPNB1AK53 854 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 OATP04181 439 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 MSANTD4Q8NCY6 345 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 RIOK1Q9BRS2 568 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 CD109Q6YHK3 1445 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 IRX3P78415 501 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 ITIH3Q06033 890 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 CTAGE5O15320 804 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 SPOPO43791 374 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 HSPA4P34932 840 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 MNAT1P51948 309 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 SLFN5Q08AF3 891 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 HS2ST1Q7LGA3 356 aa20.03■□□□□ 0.8
CACNA1A-227ENST00000636549 RBM8AQ9Y5S9 174 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms