RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 ALDH1A1P00352 501 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 F13A1P00488 732 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 EGFRP00533 1210 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 CELA3AP09093 270 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 CT47B1P0C2W7 299 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 NAT2P11245 290 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 TFE3P19532 575 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 GNALP38405 381 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 STAT3P40763 770 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 CASP7P55210 303 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 HYAL2Q12891 473 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 NNTQ13423 1086 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 NCAPHQ15003 741 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 TTF1Q15361 905 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 TRIP4Q15650 581 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 C4orf17Q53FE4 359 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 ZFYVE27Q5T4F4 411 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 WDR78Q5VTH9 848 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 SPTY2D1Q68D10 685 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 CNNM4Q6P4Q7 775 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 POTEHQ6S545 545 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 POTEBQ6S5H4 581 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 C6orf15Q6UXA7 325 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 KRT25Q7Z3Z0 450 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 DDX42Q86XP3 938 aaKnown RBP eCLIP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 JAMLQ86YT9 394 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 PASD1Q8IV76 773 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 FAM178BQ8IXR5 827 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 CHPFQ8IZ52 775 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 SAMD3Q8N6K7 520 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 FAM169BQ8N8A8 192 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 RBBP8NLQ8NC74 664 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 ZNF280CQ8ND82 737 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 GLIS3Q8NEA6 775 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 TSR2Q969E8 191 aaKnown RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 MARVELD3Q96A59 401 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 AGBL1Q96MI9 1066 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 NECAB3Q96P71 396 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 HS3ST6Q96QI5 342 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 TM9SF2Q99805 663 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 SPATA9Q9BWV2 254 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 EMILIN2Q9BXX0 1053 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 LRRC3Q9BY71 257 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 CHRDQ9H2X0 955 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 BRMS1Q9HCU9 246 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 BRD7Q9NPI1 651 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 TERF2IPQ9NYB0 399 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 KANSL3Q9P2N6 904 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 ZMYM5Q9UJ78 669 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 A0A1B0GTH6 734 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 RNF223E7ERA6 249 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 POTEB2H3BUK9 544 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 TSPAN6O43657 245 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 DIAPH1O60610 1272 aaKnown RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 RFPL3O75679 317 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 SASH3O75995 380 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 ZIC2O95409 532 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 LDHAP00338 332 aaKnown RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 NR3C2P08235 984 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 NBPF7P0C2Y1 421 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 U2AF1L5P0DN76 240 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 RARAP10276 462 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 ARAFP10398 606 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 GARTP22102 1010 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 PAX3P23760 479 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 CCND1P24385 295 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 FLT3P36888 993 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 CRKP46108 304 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 VEGFBP49765 207 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 CDKN1CP49918 316 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 RNF144AP50876 292 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 WDR4P57081 412 aaKnown RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 U2AF1Q01081 240 aaKnown RBP eCLIP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 KCNC4Q03721 635 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 CLCQ05315 142 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 ITKQ08881 620 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 PABPC4Q13310 644 aaKnown RBP eCLIP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 NEUROD1Q13562 356 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 CCINQ13939 588 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 VPS72Q15906 364 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 NFE2Q16621 373 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 CTC1Q2NKJ3 1217 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 GFOD2Q3B7J2 385 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 MAP9Q49MG5 647 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 C4orf46Q504U0 113 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 TM4SF20Q53R12 229 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 RPS26P11Q5JNZ5 115 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 EFHC2Q5JST6 749 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 HGSNATQ68CP4 663 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 VHLLQ6RSH7 139 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 KSR2Q6VAB6 950 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 BNC2Q6ZN30 1099 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 Q6ZVU0 165 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 SPATC1Q76KD6 591 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 REC114Q7Z4M0 266 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 LSRQ86X29 649 aaPredicted RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 THNSL2Q86YJ6 484 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 CCNJLQ8IV13 435 aa2.28□□□□□ -2.04
GABRB3-220ENST00000636512 C19orf47Q8N9M1 422 aaKnown RBP2.28□□□□□ -2.04
GABRB3-220ENST00000636512 ZBTB38Q8NAP3 1195 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms