RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	YDJC	A8MPS7	323 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058		M0R2C6	588 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	LDHB	P07195	334 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	FKBP1A	P62942	108 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	MECOM	Q03112	1051 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	GRIK5	Q16478	980 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	STRIP1	Q5VSL9	837 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	TTLL5	Q6EMB2	1281 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	CCDC129	Q6ZRS4	1044 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	TBC1D32	Q96NH3	1257 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	KCNQ5	Q9NR82	932 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	SUGT1	Q9Y2Z0	365 aa		11.53	□□□□□ -0.56
CACNA1A-223	ENST00000636058	USP17L3	A6NCW0	530 aa		11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	USP17L4	A6NCW7	530 aa		11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	RBM25	P49756	843 aa	Known RBP	11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	DACT2	Q5SW24	774 aa		11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	NAA16	Q6N069	864 aa	Predicted RBP	11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	KIAA1211	Q6ZU35	1233 aa		11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	USP17L1	Q7RTZ2	530 aa		11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	ADGRA1	Q86SQ6	560 aa		11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	DZIP1	Q86YF9	867 aa	Known RBP	11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	CERS5	Q8N5B7	392 aa		11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	C22orf23	Q9BZE7	217 aa		11.52	□□□□□ -0.57
CACNA1A-223	ENST00000636058	GPAA1	O43292	621 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	CYP7A1	P22680	504 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	PRELP	P51888	382 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	RASSF7	Q02833	373 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	PTH1R	Q03431	593 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	NIM1K	Q8IY84	436 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MAP4K1	Q92918	833 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	FBXW7	Q969H0	707 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	ZNRF3	Q9ULT6	936 aa		11.51	□□□□□ -0.57
CACNA1A-223	ENST00000636058	FOXP2	O15409	715 aa		11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	HSPD1	P10809	573 aa	Known RBP	11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	YBX3	P16989	372 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	HSPA4	P34932	840 aa		11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	GSTO1	P78417	241 aa		11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	AIDA	Q96BJ3	306 aa		11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	STRBP	Q96SI9	672 aa	Known RBP	11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	RIOK1	Q9BRS2	568 aa	Known RBP	11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	DSCC1	Q9BVC3	393 aa		11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MXD3	Q9BW11	206 aa		11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	RBM19	Q9Y4C8	960 aa	Known RBP	11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MYH2	Q9UKX2	1941 aa		11.5	□□□□□ -0.57
CACNA1A-223	ENST00000636058	SBF1	O95248	1867 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	DICER1	Q9UPY3	1922 aa	Known RBP	11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MAGEB6P1	A0A0J9YX57	407 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MBD4	O95243	580 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	DIXDC1	Q155Q3	683 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	VPS53	Q5VIR6	699 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	LCORL	Q8N3X6	602 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MIGA1	Q8NAN2	632 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	JDP2	Q8WYK2	163 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	FAM163A	Q96GL9	167 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MROH7-TTC4	A0A0A0MT08	1334 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	GAK	O14976	1311 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MYO3B	Q8WXR4	1341 aa		11.49	□□□□□ -0.57
CACNA1A-223	ENST00000636058	GOLGB1	Q14789	3259 aa	Known RBP	11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	LDHC	P07864	332 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	VIL1	P09327	827 aa	Known RBP	11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	GNAT2	P19087	354 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MCC	P23508	829 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	NECTIN1	Q15223	517 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	ARHGAP27	Q6ZUM4	889 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	SLF2	Q8IX21	1173 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	KCNB2	Q92953	911 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	IL17RA	Q96F46	866 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	ARMT1	Q9H993	441 aa		11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	TTF2	Q9UNY4	1162 aa	Known RBP	11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	RBM8A	Q9Y5S9	174 aa	Known RBP	11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058		U3KPZ7	1027 aa	Predicted RBP	11.48	□□□□□ -0.57
CACNA1A-223	ENST00000636058	ADAMTSL1	Q8N6G6	1762 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	ZMYM6	O95789	1325 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	GPR75-ASB3	A0A0A6YYF3	556 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	PATL2	C9JE40	543 aa	Known RBP	11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058		F8W031	263 aa	Predicted RBP	11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	FZD9	O00144	591 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	PSMD14	O00487	310 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	RAD17	O75943	681 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	LMNB1	P20700	586 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	ANAPC15	P60006	121 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	PPP4C	P60510	307 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	DYNLL1	P63167	89 aa	Known RBP	11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	HDLBP	Q00341	1268 aa	Known RBP	11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	CXCL9	Q07325	125 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	CERS3	Q8IU89	383 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	KIAA0825	Q8IV33	1275 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	GML	Q99445	158 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	KIF2C	Q99661	725 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	MRI	Q9BWK5	157 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	PALD1	Q9ULE6	856 aa		11.47	□□□□□ -0.57
CACNA1A-223	ENST00000636058	GSG1L2	A8MUP6	293 aa		11.46	□□□□□ -0.57
CACNA1A-223	ENST00000636058	BAG3	O95817	575 aa		11.46	□□□□□ -0.57
CACNA1A-223	ENST00000636058	CIAPIN1	Q6FI81	312 aa		11.46	□□□□□ -0.57
CACNA1A-223	ENST00000636058	HHIPL2	Q6UWX4	724 aa		11.46	□□□□□ -0.57
CACNA1A-223	ENST00000636058	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.46	□□□□□ -0.57
CACNA1A-223	ENST00000636058	DAGLA	Q9Y4D2	1042 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms