RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 PLXNC1O60486 1568 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 C2orf69Q8N8R5 385 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 DBNDD1Q9H9R9 158 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 MAP3K15Q6ZN16 1313 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 SOCS7O14512 581 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 DNM1Q05193 864 aaKnown RBP16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 SMIM5Q71RC9 77 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 SCLT1Q96NL6 688 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 KRT23Q9C075 422 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 SSH2Q76I76 1423 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 CPLX3Q8WVH0 158 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 CUL5Q93034 780 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 SAMM50Q9Y512 469 aa16.49■□□□□ 0.23
NEDD4L-238ENST00000635997 B4E1Z4 1266 aa16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 MYCP01106 439 aaPredicted RBP16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 SKIDA1Q1XH10 827 aa16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 ZAP70P43403 619 aa16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 USP26Q9BXU7 913 aa16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 TTF2Q9UNY4 1162 aaKnown RBP16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 TCP10Q12799 353 aa16.48■□□□□ 0.23
NEDD4L-238ENST00000635997 ALKQ9UM73 1620 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 MYOM2P54296 1465 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 FAM173BQ6P4H8 233 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 EAF2Q96CJ1 260 aaPredicted RBP16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 PDIA4P13667 645 aaKnown RBP16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 CBX1P83916 185 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 CCDC183Q5T5S1 534 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 TMC4Q7Z404 712 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 BBXQ8WY36 941 aaPredicted RBP16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 ZSCAN22P10073 491 aaPredicted RBP16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 PUM3Q15397 648 aaKnown RBP16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 MFSD14BQ5SR56 506 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 ATP7BP35670 1465 aa16.47■□□□□ 0.23
NEDD4L-238ENST00000635997 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 TECPR2O15040 1411 aa16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 ARMC9Q7Z3E5 817 aa16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 WDR66Q8TBY9 1149 aa16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 NCOA5Q9HCD5 579 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 AATFQ9NY61 560 aaKnown RBP eCLIP16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 DCCP43146 1447 aa16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 RBM25P49756 843 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.23
NEDD4L-238ENST00000635997 GPAA1O43292 621 aa16.46■□□□□ 0.22
NEDD4L-238ENST00000635997 MKRN3Q13064 507 aaKnown RBP16.46■□□□□ 0.22
NEDD4L-238ENST00000635997 DHX32Q7L7V1 743 aaKnown RBP16.46■□□□□ 0.22
NEDD4L-238ENST00000635997 TBC1D22AQ8WUA7 517 aa16.46■□□□□ 0.22
NEDD4L-238ENST00000635997 TCP11L1Q9NUJ3 509 aa16.46■□□□□ 0.22
NEDD4L-238ENST00000635997 AFMP43652 599 aa16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 DCAF15Q66K64 600 aa16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 DENND2AQ9ULE3 1009 aa16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 ANAPC15P60006 121 aa16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 CNNM2Q9H8M5 875 aa16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 TMEM266Q2M3C6 531 aa16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 ZNF277Q9NRM2 450 aaPredicted RBP16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 ANO10Q9NW15 660 aa16.45■□□□□ 0.22
NEDD4L-238ENST00000635997 ERBB4Q15303 1308 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 KIF1BO60333 1816 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 MYL10Q9BUA6 226 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 RAB34Q9BZG1 259 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 SUPT20HL1Q3ZLR7 823 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 SEC62Q99442 399 aaKnown RBP16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 GYG1P46976 350 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 ZNF165P49910 485 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 TTC6Q86TZ1 520 aa16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 FHDC1Q9C0D6 1143 aaPredicted RBP16.44■□□□□ 0.22
NEDD4L-238ENST00000635997 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 PAF1Q8N7H5 531 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 TEKT1Q969V4 418 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 ZNF521Q96K83 1311 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 CPSF1Q10570 1443 aaKnown RBP16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 NAPAP54920 295 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 TMTC2Q8N394 836 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 KIF24Q5T7B8 1368 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 MST1RQ04912 1400 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 SCNN1DP51172 638 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 NFIXQ14938 502 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 IQSEC2Q5JU85 1478 aa16.43■□□□□ 0.22
NEDD4L-238ENST00000635997 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 SMTNL1A8MU46 457 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 KBTBD3Q8NAB2 608 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 KIDINS220Q9ULH0 1771 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 LPIN2Q92539 896 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 TCERG1LQ5VWI1 586 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 hCG_1642624A0A1W2PR95 340 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 TCP10L2B9ZVM9 353 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms