RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 UBAP1LF5GYI3 381 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 GBP1P32455 592 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 PKP1Q13835 747 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 NUCKS1Q9H1E3 243 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 FAM13AO94988 1023 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 UBA7P41226 1012 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 PLVAPQ9BX97 442 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 VCXQ9H320 206 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 RNF216Q9NWF9 866 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 LDHAL6AQ6ZMR3 332 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 ZNF804AQ7Z570 1209 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 ACSBG1Q96GR2 724 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 FAM204AQ9H8W3 233 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 USP16Q9Y5T5 823 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 FRMD3A2A2Y4 597 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 GNGT1P63211 74 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 GSTA5Q7RTV2 222 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 TRIM6Q9C030 488 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 RAPGEF3O95398 923 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 EEF2P13639 858 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 MAP7D1Q3KQU3 841 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 CPLX4Q7Z7G2 160 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 PRPF31Q8WWY3 499 aaKnown RBP11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 ANAPC4Q9UJX5 808 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 ABCA5Q8WWZ7 1642 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 ZBTB24O43167 697 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 CCT5P48643 541 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 AK2P54819 239 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 TPD52P55327 224 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 ETF1P62495 437 aaKnown RBP11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 PROCA1Q8NCQ7 364 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 SLC26A6Q9BXS9 759 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 LZTFL1Q9NQ48 299 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 ARHGAP6O43182 974 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 IARSP41252 1262 aaKnown RBP11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 LONRF2Q1L5Z9 754 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 TDRD7Q8NHU6 1098 aaKnown RBP11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 MICAL1Q8TDZ2 1067 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 TMEM110-MUSTN1A8MSY1 372 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 METAP2P50579 478 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 HEATR3Q7Z4Q2 680 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 C8orf37Q96NL8 207 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 RIPOR2Q9Y4F9 1068 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 KRT28Q7Z3Y7 464 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 HAUS7Q99871 368 aa11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
SPTAN1-228ENST00000635853 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 PDE1AP54750 535 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 DBN1Q16643 649 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 STX8Q9UNK0 236 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 SH3BGRP55822 239 aaPredicted RBP11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 WHAMMP3Q1A5X7 153 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 MSANTD4Q8NCY6 345 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 ADAM21Q9UKJ8 722 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 GAS8O95995 478 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 CCDC6Q16204 474 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 TRIM47Q96LD4 638 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 BICC1Q9H694 974 aaKnown RBP11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 DCTPP1Q9H773 170 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 GJA3Q9Y6H8 435 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 TEX14Q8IWB6 1497 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 TRIM66O15016 1216 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 PCK1P35558 622 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 CCDC14Q49A88 953 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 BCAS4Q8TDM0 211 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 TRIM4Q9C037 500 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 RASAL2Q9UJF2 1139 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 ZBTB21Q9ULJ3 1066 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 ABCC5O15440 1437 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 C9orf84Q5VXU9 1444 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 POLR3AO14802 1390 aaPredicted RBP11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 CHUKO15111 745 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 TOM1O60784 492 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 TFCP2L1Q9NZI6 479 aa11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
SPTAN1-228ENST00000635853 PPP1R12AO14974 1030 aaPredicted RBP11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 AKNAD1Q5T1N1 836 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 CFAP58Q5T655 872 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 EP400NLQ6ZTU2 488 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 KCNG4Q8TDN1 519 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 RMND1Q9NWS8 449 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 SAMD15Q9P1V8 674 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 NRBP1Q9UHY1 535 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 PTPRCP08575 1304 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 ARHGEF12Q9NZN5 1544 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 FCHSD1Q86WN1 690 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 ANKRD44Q8N8A2 993 aa11.03□□□□□ -0.64
SPTAN1-228ENST00000635853 ARMC2Q8NEN0 867 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms