RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 USP6P35125 1406 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 CCDC151A5D8V7 595 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 STX10O60499 249 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 KIAA0754O94854 1291 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 ZFYP08048 801 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 PDIA3P30101 505 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 ST3GAL1Q11201 340 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 LONRF2Q1L5Z9 754 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 LMBR1LQ6UX01 489 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 BPIFA3Q9BQP9 254 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 SNRKQ9NRH2 765 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 RAI14Q9P0K7 980 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 CLIC4Q9Y696 253 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 NEO1Q92859 1461 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 KIDINS220Q9ULH0 1771 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 SHTN1A0MZ66 631 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 GOLGA8AA7E2F4 631 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 TXLNAP40222 546 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 FBXO18Q8NFZ0 1043 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 SMARCC2Q8TAQ2 1214 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 CTAGE1Q96RT6 745 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 KCNH3Q9ULD8 1083 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 AKAP2Q9Y2D5 859 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 NFE2L3Q9Y4A8 694 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 RNMTO43148 476 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 ACTN2P35609 894 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 RRP12Q5JTH9 1297 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 CCDC47Q96A33 483 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 ZBTB9Q96C00 473 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 NUP88Q99567 741 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 PARD6BQ9BYG5 372 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 FANCLQ9NW38 375 aa9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 MKRN1Q9UHC7 482 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-246ENST00000635739 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 SSRP1Q08945 709 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 ESCO1Q5FWF5 840 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 CC2D1AQ6P1N0 951 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 MLKLQ8NB16 471 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 IFT172Q9UG01 1749 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 TADA3O75528 432 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 ATP1A3P13637 1013 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 IL15P40933 162 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 GCKRQ14397 625 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 KIAA1328Q86T90 577 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 ZCCHC17Q9NP64 241 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 DLC1Q96QB1 1528 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 PXDNLA1KZ92 1463 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 CARMIL3Q8ND23 1372 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 CUTAO60888 179 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 RDXP35241 583 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 ADKP55263 362 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 KRI1Q8N9T8 703 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 IP6K1Q92551 441 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 HAUS7Q99871 368 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 EFCC1Q9HA90 598 aa9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 MAGEC2Q9UBF1 373 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 DBNLQ9UJU6 430 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 RRP15Q9Y3B9 282 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-246ENST00000635739 ADGRL3Q9HAR2 1447 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 MYO1CO00159 1063 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 N4BP3O15049 544 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 ZBTB43O43298 467 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 PNOCQ13519 176 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 ADAM21Q9UKJ8 722 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 FHOD1Q9Y613 1164 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 TCHHQ07283 1943 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 CPS1P31327 1500 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 KIF20BQ96Q89 1820 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 VSTM4Q8IW00 320 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 PPM1EQ8WY54 764 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 DESI2Q9BSY9 194 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 COPRSQ9NQ92 184 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 RNF216Q9NWF9 866 aaPredicted RBP9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 CNGA4Q8IV77 575 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 IGSF22Q8N9C0 903 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 METTL22Q9BUU2 404 aaPredicted RBP9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 SLC26A6Q9BXS9 759 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 PDE11AQ9HCR9 933 aa9.57□□□□□ -0.88
SMARCA2-246ENST00000635739 IDH1O75874 414 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 PLA2G4AP47712 749 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 SRGAP1Q7Z6B7 1085 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 CTCFLQ8NI51 663 aaPredicted RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 NUP133Q8WUM0 1156 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 CCDC196A0A1B0GTZ2 297 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 TIMM10P62072 90 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 GOLGA8FQ08AF8 430 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 GOLGA8DPQ0D2H9 430 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 SLC39A14Q15043 492 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 NAPGQ99747 312 aaPredicted RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 TTF2Q9UNY4 1162 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 TNRQ92752 1358 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 IFIT3O14879 490 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 HSPD1P10809 573 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 SLC39A6Q13433 755 aa9.56□□□□□ -0.88
SMARCA2-246ENST00000635739 PROSER3Q2NL68 480 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms