RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 DCPSQ96C86 337 aaKnown RBP11.94□□□□□ -0.5
LINC00339-210ENST00000635675 GLIS2Q9BZE0 524 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-210ENST00000635675 GGA3Q9NZ52 723 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 AKAP11Q9UKA4 1901 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 PITPNM2Q9BZ72 1349 aa11.93□□□□□ -0.5
LINC00339-210ENST00000635675 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
LINC00339-210ENST00000635675 TRAF5O00463 557 aa11.93□□□□□ -0.5
LINC00339-210ENST00000635675 LDHBP07195 334 aaKnown RBP11.93□□□□□ -0.5
LINC00339-210ENST00000635675 IFIT2P09913 472 aaKnown RBP11.93□□□□□ -0.5
LINC00339-210ENST00000635675 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
LINC00339-210ENST00000635675 PRDX5P30044 214 aa11.93□□□□□ -0.5
LINC00339-210ENST00000635675 APLP1P51693 650 aa11.93□□□□□ -0.5
LINC00339-210ENST00000635675 IRX6P78412 446 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-210ENST00000635675 FMR1Q06787 632 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00339-210ENST00000635675 KRT26Q7Z3Y9 468 aa11.93□□□□□ -0.5
LINC00339-210ENST00000635675 USP48Q86UV5 1035 aa11.93□□□□□ -0.5
LINC00339-210ENST00000635675 ZGPATQ8N5A5 531 aaKnown RBP11.93□□□□□ -0.5
LINC00339-210ENST00000635675 MAST3O60307 1309 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 AOX1Q06278 1338 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 SMARCA5O60264 1052 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-210ENST00000635675 RBM5P52756 815 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00339-210ENST00000635675 SPTY2D1Q68D10 685 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-210ENST00000635675 HHIPL2Q6UWX4 724 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 DLK2Q6UY11 383 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 TBC1D9Q6ZT07 1266 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 SULF1Q8IWU6 871 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 TEKT1Q969V4 418 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 ZDHHC15Q96MV8 337 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 SNRKQ9NRH2 765 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 ABCF2Q9UG63 623 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
LINC00339-210ENST00000635675 ADM5C9JUS6 153 aa11.91□□□□□ -0.5
LINC00339-210ENST00000635675 CYP2E1P05181 493 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-210ENST00000635675 CST9Q5W186 159 aa11.91□□□□□ -0.5
LINC00339-210ENST00000635675 APOBEC3HQ6NTF7 200 aaKnown RBP11.91□□□□□ -0.5
LINC00339-210ENST00000635675 BCL11AQ9H165 835 aa11.91□□□□□ -0.5
LINC00339-210ENST00000635675 ECM29Q5VYK3 1845 aa11.9□□□□□ -0.5
LINC00339-210ENST00000635675 MYO1BO43795 1136 aa11.9□□□□□ -0.5
LINC00339-210ENST00000635675 IGHDP01880 384 aa11.9□□□□□ -0.5
LINC00339-210ENST00000635675 ZAP70P43403 619 aa11.9□□□□□ -0.5
LINC00339-210ENST00000635675 DIXDC1Q155Q3 683 aa11.9□□□□□ -0.5
LINC00339-210ENST00000635675 ERICH6Q7L0X2 663 aa11.9□□□□□ -0.5
LINC00339-210ENST00000635675 ZNF384Q8TF68 577 aa11.9□□□□□ -0.5
LINC00339-210ENST00000635675 GCC1Q96CN9 775 aa11.9□□□□□ -0.5
LINC00339-210ENST00000635675 RWDD1Q9H446 243 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-210ENST00000635675 TDRD3Q9H7E2 651 aaKnown RBP11.9□□□□□ -0.5
LINC00339-210ENST00000635675 SCAF8Q9UPN6 1271 aaKnown RBP11.9□□□□□ -0.5
LINC00339-210ENST00000635675 TRPM7Q96QT4 1865 aa11.89□□□□□ -0.51
LINC00339-210ENST00000635675 CLRN2A0PK11 232 aa11.89□□□□□ -0.51
LINC00339-210ENST00000635675 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
LINC00339-210ENST00000635675 MECOMQ03112 1051 aa11.89□□□□□ -0.51
LINC00339-210ENST00000635675 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
LINC00339-210ENST00000635675 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
LINC00339-210ENST00000635675 SMC5Q8IY18 1101 aa11.89□□□□□ -0.51
LINC00339-210ENST00000635675 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00339-210ENST00000635675 FAM163AQ96GL9 167 aaPredicted RBP11.89□□□□□ -0.51
LINC00339-210ENST00000635675 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
LINC00339-210ENST00000635675 ZNF70Q9UC06 446 aaPredicted RBP11.89□□□□□ -0.51
LINC00339-210ENST00000635675 DAGLAQ9Y4D2 1042 aa11.89□□□□□ -0.51
LINC00339-210ENST00000635675 IGSF3O75054 1194 aa11.88□□□□□ -0.51
LINC00339-210ENST00000635675 ATP5JP18859 108 aa11.88□□□□□ -0.51
LINC00339-210ENST00000635675 HTRA3P83110 453 aa11.88□□□□□ -0.51
LINC00339-210ENST00000635675 DZIP1Q86YF9 867 aaKnown RBP11.88□□□□□ -0.51
LINC00339-210ENST00000635675 NSUN4Q96CB9 384 aaKnown RBP11.88□□□□□ -0.51
LINC00339-210ENST00000635675 PIH1D3Q9NQM4 214 aaKnown RBP11.88□□□□□ -0.51
LINC00339-210ENST00000635675 LRP2BPQ9P2M1 347 aa11.88□□□□□ -0.51
LINC00339-210ENST00000635675 NDUFB9Q9Y6M9 179 aa11.88□□□□□ -0.51
LINC00339-210ENST00000635675 GAKO14976 1311 aa11.88□□□□□ -0.51
LINC00339-210ENST00000635675 MYH2Q9UKX2 1941 aa11.88□□□□□ -0.51
LINC00339-210ENST00000635675 CELF2O95319 508 aaKnown RBP11.87□□□□□ -0.51
LINC00339-210ENST00000635675 NEFLP07196 543 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 ANKRD45Q5TZF3 282 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 PRAMEF18Q5VWM3 479 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 DEFB129Q9H1M3 183 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 ANTXR1Q9H6X2 564 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 VEZTQ9HBM0 779 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
LINC00339-210ENST00000635675 MYO5AQ9Y4I1 1855 aaKnown RBP11.87□□□□□ -0.51
LINC00339-210ENST00000635675 LDHCP07864 332 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 GSTO1P78417 241 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 FKBP1CQ5VVH2 108 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 CDC42EP5Q6NZY7 148 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 DNAJC5GQ8N7S2 189 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 PPP2R3BQ9Y5P8 575 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 MROH7-TTC4A0A0A0MT08 1334 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 GPR75-ASB3A0A0A6YYF3 556 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 CACNB3P54284 484 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 TNFAIP1Q13829 316 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 RASA3Q14644 834 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 TTF1Q15361 905 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-210ENST00000635675 OTUD7AQ8TE49 926 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-210ENST00000635675 HAUS7Q99871 368 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 ZNF408Q9H9D4 720 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 USP40Q9NVE5 1235 aa11.86□□□□□ -0.51
LINC00339-210ENST00000635675 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
LINC00339-210ENST00000635675 SALL3Q9BXA9 1300 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms