RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 TRIM7Q9C029 511 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 BAG3O95817 575 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 ARID4AP29374 1257 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-211ENST00000635193 LEO1Q8WVC0 666 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-211ENST00000635193 DUOX2Q9NRD8 1548 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 ZFYVE9O95405 1425 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 INSRP06213 1382 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 SLC27A2O14975 620 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 LDHCP07864 332 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 CYP7A1P22680 504 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
COL11A1-211ENST00000635193 IGSF22Q8N9C0 903 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 ZPR1O75312 459 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 SETSIPP0DME0 302 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 CWF19L2Q2TBE0 894 aaKnown RBP13.15□□□□□ -0.3
COL11A1-211ENST00000635193 INTS8Q75QN2 995 aaKnown RBP13.15□□□□□ -0.3
COL11A1-211ENST00000635193 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 CACNA2D3Q8IZS8 1091 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 STMN2Q93045 179 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 TSGA10Q9BZW7 698 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 SBNO2Q9Y2G9 1366 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 BRD1O95696 1058 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 NEK11Q8NG66 645 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 PPP1R12CQ9BZL4 782 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 RABEP2Q9H5N1 569 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 TFCP2Q12800 502 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
COL11A1-211ENST00000635193 AOX1Q06278 1338 aa13.15□□□□□ -0.31
COL11A1-211ENST00000635193 FERP16591 822 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 IQUBQ8NA54 791 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 TTF2Q9UNY4 1162 aaKnown RBP13.14□□□□□ -0.31
COL11A1-211ENST00000635193 NOL3O60936 208 aaKnown RBP13.14□□□□□ -0.31
COL11A1-211ENST00000635193 VIMP08670 466 aaKnown RBP13.14□□□□□ -0.31
COL11A1-211ENST00000635193 GCKP35557 465 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 GNAQP50148 359 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 UBLCP1Q8WVY7 318 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-211ENST00000635193 SGSM2O43147 1006 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 CCT6AP40227 531 aaKnown RBP13.14□□□□□ -0.31
COL11A1-211ENST00000635193 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 LLPHQ9BRT6 129 aaKnown RBP13.14□□□□□ -0.31
COL11A1-211ENST00000635193 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 NUTM2BA6NNL0 878 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-211ENST00000635193 NUTM2EB1AL46 878 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-211ENST00000635193 RXRAP19793 462 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 TSNAXIP1Q2TAA8 658 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 KCNK9Q9NPC2 374 aa13.14□□□□□ -0.31
COL11A1-211ENST00000635193 GOLGA6BA6NDN3 693 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 TSPY3P0CV98 308 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 TSPY8P0CW00 308 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 GBP1P32455 592 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 CABS1Q96KC9 395 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 NPC1L1Q9UHC9 1359 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 CALM1P0DP23 149 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 CALM2P0DP24 149 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 CALM3P0DP25 149 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
COL11A1-211ENST00000635193 FANCAO15360 1455 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 CALML3P27482 149 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 PNMA8AQ86V59 439 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-211ENST00000635193 MTRF1LQ9UGC7 380 aaKnown RBP13.13□□□□□ -0.31
COL11A1-211ENST00000635193 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
COL11A1-211ENST00000635193 KIF3CO14782 793 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 MCM7P33993 719 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 ACTN2P35609 894 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 TRIM14Q14142 442 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 G2E3Q7L622 706 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 HELLSQ9NRZ9 838 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
COL11A1-211ENST00000635193 VCXQ9H320 206 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 ALDH3A1P30838 453 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 NAPAP54920 295 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 NLRP12P59046 1061 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 CCDC174Q6PII3 467 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 CDC37L1Q7L3B6 337 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 PHF23Q9BUL5 403 aaPredicted RBP13.12□□□□□ -0.31
COL11A1-211ENST00000635193 DNAI2Q9GZS0 605 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 AP1ARQ63HQ0 302 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 CYP26C1Q6V0L0 522 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 RPAINQ86UA6 219 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 FERMT2Q96AC1 680 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 BICC1Q9H694 974 aaKnown RBP13.12□□□□□ -0.31
COL11A1-211ENST00000635193 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
COL11A1-211ENST00000635193 TRMT1LQ7Z2T5 733 aaKnown RBP13.12□□□□□ -0.31
COL11A1-211ENST00000635193 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
COL11A1-211ENST00000635193 C8orf74Q6P047 294 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms