RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 FKBP1BP68106 108 aa19.34■□□□□ 0.69
LINC00339-207ENST00000634712 GRIK5Q16478 980 aa19.34■□□□□ 0.69
LINC00339-207ENST00000634712 ZGPATQ8N5A5 531 aaKnown RBP19.34■□□□□ 0.69
LINC00339-207ENST00000634712 DEFB129Q9H1M3 183 aa19.34■□□□□ 0.69
LINC00339-207ENST00000634712 HSPA1AP0DMV8 641 aaKnown RBP19.33■□□□□ 0.69
LINC00339-207ENST00000634712 HSPA1BP0DMV9 641 aaKnown RBP19.33■□□□□ 0.69
LINC00339-207ENST00000634712 RPAP2Q8IXW5 612 aaPredicted RBP19.33■□□□□ 0.69
LINC00339-207ENST00000634712 MRIQ9BWK5 157 aa19.33■□□□□ 0.69
LINC00339-207ENST00000634712 TDRD3Q9H7E2 651 aaKnown RBP19.33■□□□□ 0.69
LINC00339-207ENST00000634712 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.69
LINC00339-207ENST00000634712 PCNTO95613 3336 aa19.33■□□□□ 0.68
LINC00339-207ENST00000634712 HMMRO75330 724 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 LDHBP07195 334 aaKnown RBP19.32■□□□□ 0.68
LINC00339-207ENST00000634712 TNFAIP1Q13829 316 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 RGMBQ6NW40 437 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 AIDAQ96BJ3 306 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 GPR108Q9NPR9 543 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 ZNF70Q9UC06 446 aaPredicted RBP19.32■□□□□ 0.68
LINC00339-207ENST00000634712 PPP2R3BQ9Y5P8 575 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.32■□□□□ 0.68
LINC00339-207ENST00000634712 MYH13Q9UKX3 1938 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 ZNF157P51786 506 aaPredicted RBP19.32■□□□□ 0.68
LINC00339-207ENST00000634712 MAP2K1Q02750 393 aaPredicted RBP19.32■□□□□ 0.68
LINC00339-207ENST00000634712 SPDYE2Q495Y8 402 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 HSP90AB4PQ58FF6 505 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
LINC00339-207ENST00000634712 ARAP2Q8WZ64 1704 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 ZBTB22O15209 634 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 MAP2K2P36507 400 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 TNNI2P48788 182 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 RASGRF1Q13972 1273 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 SUPT20HL1Q3ZLR7 823 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 TNNI3KQ59H18 835 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 CCDC158Q5M9N0 1113 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 SPTY2D1Q68D10 685 aaPredicted RBP19.31■□□□□ 0.68
LINC00339-207ENST00000634712 HHIPL2Q6UWX4 724 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 ARMC9Q7Z3E5 817 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 ERC1Q8IUD2 1116 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 CCDC102AQ96A19 550 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 ZDHHC15Q96MV8 337 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 TMOD2Q9NZR1 351 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 ABCF2Q9UG63 623 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 FPGT-TNNI3KV9GXZ4 949 aa19.31■□□□□ 0.68
LINC00339-207ENST00000634712 SALL1Q9NSC2 1324 aa19.3■□□□□ 0.68
LINC00339-207ENST00000634712 AOC2O75106 756 aa19.3■□□□□ 0.68
LINC00339-207ENST00000634712 UQCRFS1P1P0C7P4 283 aa19.3■□□□□ 0.68
LINC00339-207ENST00000634712 PRKG1Q13976 671 aa19.3■□□□□ 0.68
LINC00339-207ENST00000634712 RASA3Q14644 834 aa19.3■□□□□ 0.68
LINC00339-207ENST00000634712 EXOC6BQ9Y2D4 811 aa19.3■□□□□ 0.68
LINC00339-207ENST00000634712 COL1A1P02452 1464 aaPredicted RBP19.29■□□□□ 0.68
LINC00339-207ENST00000634712 AOX1Q06278 1338 aa19.29■□□□□ 0.68
LINC00339-207ENST00000634712 TCP10L2B9ZVM9 353 aa19.29■□□□□ 0.68
LINC00339-207ENST00000634712 UBE2Q2LH0YL09 131 aa19.29■□□□□ 0.68
LINC00339-207ENST00000634712 PRDX5P30044 214 aa19.29■□□□□ 0.68
LINC00339-207ENST00000634712 NOGQ13253 232 aa19.29■□□□□ 0.68
LINC00339-207ENST00000634712 TTC39AQ5SRH9 613 aa19.29■□□□□ 0.68
LINC00339-207ENST00000634712 ECM29Q5VYK3 1845 aa19.29■□□□□ 0.68
LINC00339-207ENST00000634712 PDS5AQ29RF7 1337 aaKnown RBP19.28■□□□□ 0.68
LINC00339-207ENST00000634712 PPP1R12BO60237 982 aaPredicted RBP19.28■□□□□ 0.68
LINC00339-207ENST00000634712 MOB2Q70IA6 237 aa19.28■□□□□ 0.68
LINC00339-207ENST00000634712 DZIP1Q86YF9 867 aaKnown RBP19.28■□□□□ 0.68
LINC00339-207ENST00000634712 SLF2Q8IX21 1173 aa19.28■□□□□ 0.68
LINC00339-207ENST00000634712 SPATA5Q8NB90 893 aa19.28■□□□□ 0.68
LINC00339-207ENST00000634712 APOBEC3HQ6NTF7 200 aaKnown RBP19.27■□□□□ 0.68
LINC00339-207ENST00000634712 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
LINC00339-207ENST00000634712 DBNDD2Q9BQY9 259 aa19.27■□□□□ 0.68
LINC00339-207ENST00000634712 WBP1LQ9NX94 342 aa19.27■□□□□ 0.68
LINC00339-207ENST00000634712 HMG20BQ9P0W2 317 aa19.27■□□□□ 0.68
LINC00339-207ENST00000634712 ANGEL1Q9UNK9 670 aaKnown RBP19.27■□□□□ 0.68
LINC00339-207ENST00000634712 PAPPA2Q9BXP8 1791 aa19.26■□□□□ 0.67
LINC00339-207ENST00000634712 ARID4AP29374 1257 aaPredicted RBP19.26■□□□□ 0.67
LINC00339-207ENST00000634712 DIXDC1Q155Q3 683 aa19.26■□□□□ 0.67
LINC00339-207ENST00000634712 CCDC8Q9H0W5 538 aaPredicted RBP19.26■□□□□ 0.67
LINC00339-207ENST00000634712 APBB1O00213 710 aa19.25■□□□□ 0.67
LINC00339-207ENST00000634712 NBPF12Q5TAG4 269 aaPredicted RBP19.25■□□□□ 0.67
LINC00339-207ENST00000634712 DAGLAQ9Y4D2 1042 aa19.25■□□□□ 0.67
LINC00339-207ENST00000634712 CACNB3P54284 484 aa19.24■□□□□ 0.67
LINC00339-207ENST00000634712 FOXN1O15353 648 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 RAB11FIP3O75154 756 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 SLC10A3P09131 477 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 MCAMP43121 646 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 IREB2P48200 963 aaKnown RBP19.23■□□□□ 0.67
LINC00339-207ENST00000634712 CTCFP49711 727 aaPredicted RBP19.23■□□□□ 0.67
LINC00339-207ENST00000634712 RRP1P56182 461 aaKnown RBP19.23■□□□□ 0.67
LINC00339-207ENST00000634712 FKBP1CQ5VVH2 108 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 PI16Q6UXB8 463 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 AACSQ86V21 672 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 SIRT2Q8IXJ6 389 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 RHPN1Q8TCX5 695 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 EAF2Q96CJ1 260 aaPredicted RBP19.23■□□□□ 0.67
LINC00339-207ENST00000634712 KIF1BPQ96EK5 621 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 TMEM39BQ9GZU3 492 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 USP40Q9NVE5 1235 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 RAI14Q9P0K7 980 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
LINC00339-207ENST00000634712 LRP2BPQ9P2M1 347 aa19.23■□□□□ 0.67
LINC00339-207ENST00000634712 FAM155AB1AL88 458 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms