RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 KLF18A0A0U1RQI7 1052 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 GOLGA8BA8MQT2 603 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 ZNF213O14771 459 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 FOXP2O15409 715 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 GPAA1O43292 621 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 ITGA6P23229 1130 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 ZNF75DP51815 510 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 NUBP1P53384 320 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 HAND2P61296 217 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 CEBPZQ03701 1054 aaKnown RBP9.42□□□□□ -0.9
GPC3-204ENST00000631057 SCARF1Q14162 830 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 LDHAL6AQ6ZMR3 332 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 CHST3Q7LGC8 479 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 BRAPQ7Z569 592 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 SPC24Q8NBT2 197 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 MYRIPQ8NFW9 859 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 KIAA1524Q8TCG1 905 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
GPC3-204ENST00000631057 USP28Q96RU2 1077 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 CNNM1Q9NRU3 951 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 RTEL1Q9NZ71 1219 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 DOT1LQ8TEK3 1739 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 MYH6P13533 1939 aa9.42□□□□□ -0.9
GPC3-204ENST00000631057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 A0A1W2PQ27 194 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 A0A1W2PQ64 194 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 A0A1W2PQD8 194 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 ERVV-1B6SEH8 477 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 IRS4O14654 1257 aaPredicted RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 CPLX1O14810 134 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 UQCRFS1P1P0C7P4 283 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 CYP19A1P11511 503 aaPredicted RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 GPTP24298 496 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 CDC25BP30305 580 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 ADD2P35612 726 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 MCAMP43121 646 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 ME1P48163 572 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 TRDNQ13061 729 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 UBE3CQ15386 1083 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 GLIPR1L2Q4G1C9 344 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 MTERF4Q7Z6M4 381 aaKnown RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 PLA2G4DQ86XP0 818 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 DRC7Q8IY82 874 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 FSIP1Q8NA03 581 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 MRPS27Q92552 414 aaKnown RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 ZFP91Q96JP5 570 aaPredicted RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 C8orf76Q96K31 380 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 TRIM5Q9C035 493 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 PUS7LQ9H0K6 701 aaKnown RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 DNAJC25Q9H1X3 360 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 PDCL3Q9H2J4 239 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 KCNF1Q9H3M0 494 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 GREM2Q9H772 168 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 ORC3Q9UBD5 711 aaPredicted RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 LAMB2P55268 1798 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 PHLPP1O60346 1717 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 GOLGA6L19H0YKK7 550 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 PDE8AO60658 829 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 YEATS4O95619 227 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 FDPSP14324 419 aaKnown RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 ARID4AP29374 1257 aaPredicted RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 GUCY1B3Q02153 619 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 HLFQ16534 295 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 SARM1Q6SZW1 724 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 VGLL2Q8N8G2 317 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 CERKQ8TCT0 537 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 KCNG4Q8TDN1 519 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 AK7Q96M32 723 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 GOLPH3LQ9H4A5 285 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 ANO10Q9NW15 660 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 BTG4Q9NY30 223 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 TRMT112Q9UI30 125 aaKnown RBP9.41□□□□□ -0.9
GPC3-204ENST00000631057 TBC1D2BQ9UPU7 963 aa9.41□□□□□ -0.9
GPC3-204ENST00000631057 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
GPC3-204ENST00000631057 CDKL5O76039 1030 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 PDE8BO95263 885 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 PTGS1P23219 599 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 IL6STP40189 918 aaPredicted RBP9.4□□□□□ -0.9
GPC3-204ENST00000631057 ANTXR2P58335 489 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 CHAF1AQ13111 956 aaPredicted RBP9.4□□□□□ -0.9
GPC3-204ENST00000631057 SNW1Q13573 536 aaKnown RBP9.4□□□□□ -0.9
GPC3-204ENST00000631057 STK38Q15208 465 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 PUM3Q15397 648 aaKnown RBP9.4□□□□□ -0.9
GPC3-204ENST00000631057 SLC9C2Q5TAH2 1124 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 ADALQ6DHV7 355 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 PI16Q6UXB8 463 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 ENGASEQ8NFI3 743 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 FBXO18Q8NFZ0 1043 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.9
GPC3-204ENST00000631057 GPHNQ9NQX3 736 aaPredicted RBP9.4□□□□□ -0.9
GPC3-204ENST00000631057 POLR3EQ9NVU0 708 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 PYCARDQ9ULZ3 195 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 HPS5Q9UPZ3 1129 aa9.4□□□□□ -0.9
GPC3-204ENST00000631057 ZMYM6O95789 1325 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 MROH5Q6ZUA9 1318 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 COL22A1Q8NFW1 1626 aaPredicted RBP9.39□□□□□ -0.91
GPC3-204ENST00000631057 TIAM2Q8IVF5 1701 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 RREB1Q92766 1687 aa9.39□□□□□ -0.91
GPC3-204ENST00000631057 CHRM1P11229 460 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms