RNA–Protein interactions for RNA: ENST00000630656.1

NRXN1-234, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-234	ENST00000630656	TMEM57	Q8N5G2	664 aa		11.92	□□□□□ -0.5
NRXN1-234	ENST00000630656	CNBD1	Q8NA66	436 aa		11.92	□□□□□ -0.5
NRXN1-234	ENST00000630656	LTBP1	Q14766	1721 aa		11.91	□□□□□ -0.5
NRXN1-234	ENST00000630656	C6orf229	H3BNL8	230 aa		11.91	□□□□□ -0.5
NRXN1-234	ENST00000630656	DDX58	O95786	925 aa	Known RBP	11.91	□□□□□ -0.5
NRXN1-234	ENST00000630656	CASP7	P55210	303 aa		11.91	□□□□□ -0.5
NRXN1-234	ENST00000630656	EPHA10	Q5JZY3	1008 aa		11.91	□□□□□ -0.5
NRXN1-234	ENST00000630656	OLFM4	Q6UX06	510 aa		11.91	□□□□□ -0.5
NRXN1-234	ENST00000630656	UBE3B	Q7Z3V4	1068 aa		11.91	□□□□□ -0.5
NRXN1-234	ENST00000630656	TRMT112	Q9UI30	125 aa	Known RBP	11.91	□□□□□ -0.5
NRXN1-234	ENST00000630656	PTPRC	P08575	1304 aa		11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	CHD4	Q14839	1912 aa		11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	KCNA3	P22001	575 aa		11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	IRX6	P78412	446 aa	Predicted RBP	11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	SCARF1	Q14162	830 aa		11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	GCKR	Q14397	625 aa		11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	SYT17	Q9BSW7	474 aa		11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	UTP14A	Q9BVJ6	771 aa	Known RBP	11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	UNC93B1	Q9H1C4	597 aa		11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	CWC25	Q9NXE8	425 aa	Predicted RBP	11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.9	□□□□□ -0.5
NRXN1-234	ENST00000630656	DICER1	Q9UPY3	1922 aa	Known RBP	11.9	□□□□□ -0.51
NRXN1-234	ENST00000630656	KIF16B	Q96L93	1317 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	TIAM2	Q8IVF5	1701 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	NPHP1	O15259	732 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	VARS	P26640	1264 aa	Known RBP	11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	BRPF1	P55201	1214 aa	Predicted RBP	11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	ZKSCAN2	Q63HK3	967 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	ATF7IP	Q6VMQ6	1270 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	KAZALD1	Q96I82	304 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	SUCLG2	Q96I99	432 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	MEIS3	Q99687	375 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	C1orf115	Q9H7X2	142 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	EVA1B	Q9NVM1	165 aa		11.89	□□□□□ -0.51
NRXN1-234	ENST00000630656	YBX3	P16989	372 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	HMGB2	P26583	209 aa	Known RBP	11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	AMHR2	Q16671	573 aa		11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	HSP90AB3P	Q58FF7	597 aa		11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	C2CD5	Q86YS7	1000 aa		11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	LINS1	Q8NG48	757 aa		11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	SRCIN1	Q9C0H9	1055 aa		11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	TLL2	Q9Y6L7	1015 aa		11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	ZNF646	O15015	1829 aa	Predicted RBP	11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	DUOX1	Q9NRD9	1551 aa		11.88	□□□□□ -0.51
NRXN1-234	ENST00000630656	SH3TC1	Q8TE82	1336 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656		H7C1W4	665 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	IRS4	O14654	1257 aa	Predicted RBP	11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	SSTR3	P32745	418 aa	Predicted RBP	11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	ST5	P78524	1137 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	NEXN	Q0ZGT2	675 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	NNT	Q13423	1086 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	LINC01559	Q495D7	138 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	PARP10	Q53GL7	1025 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	MRPL14	Q6P1L8	145 aa	Known RBP	11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	CCDC191	Q8NCU4	936 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	USP44	Q9H0E7	712 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	SEC31B	Q9NQW1	1179 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	PCDHGC3	Q9UN70	934 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	COG6	Q9Y2V7	657 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	MYH13	Q9UKX3	1938 aa		11.87	□□□□□ -0.51
NRXN1-234	ENST00000630656	RIC1	Q4ADV7	1423 aa		11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	PCCA	P05165	728 aa	Predicted RBP	11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	GTF2E1	P29083	439 aa	Predicted RBP	11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	RRP1	P56182	461 aa	Known RBP	11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	KCNH2	Q12809	1159 aa		11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	TRIM28	Q13263	835 aa	Known RBP	11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	TTLL12	Q14166	644 aa	Predicted RBP	11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	TPTE2	Q6XPS3	522 aa		11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	PPP1R42	Q7Z4L9	355 aa		11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	API5	Q9BZZ5	524 aa	Known RBP	11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.86	□□□□□ -0.51
NRXN1-234	ENST00000630656	GOLGB1	Q14789	3259 aa	Known RBP	11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	COL4A5	P29400	1685 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	GRM8	O00222	908 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	ADH1C	P00326	375 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	FOXO4	P98177	505 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	ITPRIP	Q8IWB1	547 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	DZIP1L	Q8IYY4	767 aa	Known RBP	11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	ANKRD44	Q8N8A2	993 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	ZNF511	Q8NB15	262 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	BAP1	Q92560	729 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	NYX	Q9GZU5	481 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	SCN9A	Q15858	1988 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	CDHR2	Q9BYE9	1310 aa		11.85	□□□□□ -0.51
NRXN1-234	ENST00000630656	ALDH1L1	O75891	902 aa		11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	VSIG8	P0DPA2	414 aa		11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	SRGN	P10124	158 aa		11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	INTS3	Q68E01	1043 aa	Known RBP	11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	CELF1	Q92879	486 aa	Known RBP	11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	ZNF594	Q96JF6	807 aa	Predicted RBP	11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	BRIP1	Q9BX63	1249 aa		11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	BICC1	Q9H694	974 aa	Known RBP	11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	GREM2	Q9H772	168 aa		11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	CD2AP	Q9Y5K6	639 aa		11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	LRRFIP2	Q9Y608	721 aa	Known RBP	11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.84	□□□□□ -0.51
NRXN1-234	ENST00000630656	WTIP	A6NIX2	430 aa	Predicted RBP	11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms