RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 HOOK2Q96ED9 719 aa13.99□□□□□ -0.17
CCDC163-208ENST00000629670 MAST3O60307 1309 aa13.98□□□□□ -0.17
CCDC163-208ENST00000629670 WDHD1O75717 1129 aaPredicted RBP13.98□□□□□ -0.17
CCDC163-208ENST00000629670 PUM3Q15397 648 aaKnown RBP13.98□□□□□ -0.17
CCDC163-208ENST00000629670 ALDH1L2Q3SY69 923 aa13.98□□□□□ -0.17
CCDC163-208ENST00000629670 ANKRD44Q8N8A2 993 aa13.98□□□□□ -0.17
CCDC163-208ENST00000629670 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
CCDC163-208ENST00000629670 ERO1AQ96HE7 468 aa13.98□□□□□ -0.17
CCDC163-208ENST00000629670 IQSEC3Q9UPP2 1182 aaPredicted RBP13.98□□□□□ -0.17
CCDC163-208ENST00000629670 HDAC5Q9UQL6 1122 aa13.98□□□□□ -0.17
CCDC163-208ENST00000629670 SUGT1Q9Y2Z0 365 aa13.98□□□□□ -0.17
CCDC163-208ENST00000629670 CSADQ9Y600 493 aa13.98□□□□□ -0.17
CCDC163-208ENST00000629670 SSC5DA1L4H1 1573 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 MAP3K9P80192 1104 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 SLFN5Q08AF3 891 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 ARHGEF6Q15052 776 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 MRIQ9BWK5 157 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 USP44Q9H0E7 712 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 SMC4Q9NTJ3 1288 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 TRIM17Q9Y577 477 aa13.97□□□□□ -0.17
CCDC163-208ENST00000629670 AOX1Q06278 1338 aa13.96□□□□□ -0.17
CCDC163-208ENST00000629670 KIF16BQ96L93 1317 aa13.96□□□□□ -0.17
CCDC163-208ENST00000629670 IGF2BP3O00425 579 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC163-208ENST00000629670 SLC5A1P13866 664 aa13.96□□□□□ -0.17
CCDC163-208ENST00000629670 BCAMP50895 628 aa13.96□□□□□ -0.17
CCDC163-208ENST00000629670 OPTNQ96CV9 577 aa13.96□□□□□ -0.17
CCDC163-208ENST00000629670 TMEM39BQ9GZU3 492 aa13.96□□□□□ -0.17
CCDC163-208ENST00000629670 R3HDMLQ9H3Y0 253 aa13.96□□□□□ -0.17
CCDC163-208ENST00000629670 A0A1B0GUL6 1792 aa13.96□□□□□ -0.18
CCDC163-208ENST00000629670 ECM29Q5VYK3 1845 aa13.95□□□□□ -0.18
CCDC163-208ENST00000629670 EYA2O00167 538 aa13.95□□□□□ -0.18
CCDC163-208ENST00000629670 GTF2A2P52657 109 aa13.95□□□□□ -0.18
CCDC163-208ENST00000629670 INTS3Q68E01 1043 aaKnown RBP13.95□□□□□ -0.18
CCDC163-208ENST00000629670 VGLL2Q8N8G2 317 aa13.95□□□□□ -0.18
CCDC163-208ENST00000629670 KLHDC4Q8TBB5 520 aa13.95□□□□□ -0.18
CCDC163-208ENST00000629670 WDR66Q8TBY9 1149 aa13.95□□□□□ -0.18
CCDC163-208ENST00000629670 LPIN2Q92539 896 aa13.95□□□□□ -0.18
CCDC163-208ENST00000629670 GNL3LQ9NVN8 582 aaKnown RBP13.95□□□□□ -0.18
CCDC163-208ENST00000629670 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
CCDC163-208ENST00000629670 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
CCDC163-208ENST00000629670 UBTFL1P0CB47 393 aaPredicted RBP13.94□□□□□ -0.18
CCDC163-208ENST00000629670 SP3Q02447 781 aa13.94□□□□□ -0.18
CCDC163-208ENST00000629670 CRHR2Q13324 411 aa13.94□□□□□ -0.18
CCDC163-208ENST00000629670 FKBP1CQ5VVH2 108 aa13.94□□□□□ -0.18
CCDC163-208ENST00000629670 FAM83AQ86UY5 434 aa13.94□□□□□ -0.18
CCDC163-208ENST00000629670 ZDHHC15Q96MV8 337 aa13.94□□□□□ -0.18
CCDC163-208ENST00000629670 TEPSINQ96N21 525 aa13.94□□□□□ -0.18
CCDC163-208ENST00000629670 ZFYVE28Q9HCC9 887 aa13.94□□□□□ -0.18
CCDC163-208ENST00000629670 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
CCDC163-208ENST00000629670 CCL15-CCL14A0A0B4J2E2 113 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 SLC34A2O95436 690 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 FGFR2P21802 821 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 GJA5P36382 358 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 VGLL4Q14135 290 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 CCL15Q16663 113 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 DCAF15Q66K64 600 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 HHIPL2Q6UWX4 724 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
CCDC163-208ENST00000629670 OTOP1Q7RTM1 612 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
CCDC163-208ENST00000629670 EFCC1Q9HA90 598 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 CEP126Q9P2H0 1117 aa13.93□□□□□ -0.18
CCDC163-208ENST00000629670 TAF1CQ15572 869 aaPredicted RBP13.92□□□□□ -0.18
CCDC163-208ENST00000629670 GRIK5Q16478 980 aa13.92□□□□□ -0.18
CCDC163-208ENST00000629670 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCDC163-208ENST00000629670 CD99L2Q8TCZ2 262 aa13.92□□□□□ -0.18
CCDC163-208ENST00000629670 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
CCDC163-208ENST00000629670 CIAO1O76071 339 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 CETPP11597 493 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 CACNB3P54284 484 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 PRPF38BQ5VTL8 546 aaKnown RBP13.91□□□□□ -0.18
CCDC163-208ENST00000629670 APOBEC3HQ6NTF7 200 aaKnown RBP13.91□□□□□ -0.18
CCDC163-208ENST00000629670 ERO1BQ86YB8 467 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 MS4A4AQ96JQ5 239 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 WRNIP1Q96S55 665 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 PTPN18Q99952 460 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 PTPN22Q9Y2R2 807 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 PDE4DIPQ5VU43 2346 aa13.91□□□□□ -0.18
CCDC163-208ENST00000629670 SPDYE5A6NIY4 337 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 RFX5P48382 616 aaPredicted RBP13.9□□□□□ -0.18
CCDC163-208ENST00000629670 SNAPC2Q13487 334 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 KIF22Q14807 665 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 ATP2B3Q16720 1220 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 CDAN1Q8IWY9 1227 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 BRI3BPQ8WY22 251 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 SIL1Q9H173 461 aa13.9□□□□□ -0.18
CCDC163-208ENST00000629670 NOB1Q9ULX3 412 aaKnown RBP13.9□□□□□ -0.18
CCDC163-208ENST00000629670 SEMA3EO15041 775 aa13.89□□□□□ -0.19
CCDC163-208ENST00000629670 LDHBP07195 334 aaKnown RBP13.89□□□□□ -0.19
CCDC163-208ENST00000629670 IL15P40933 162 aaPredicted RBP13.89□□□□□ -0.19
CCDC163-208ENST00000629670 NBPF11Q86T75 865 aa13.89□□□□□ -0.19
CCDC163-208ENST00000629670 FAM151AQ8WW52 585 aa13.89□□□□□ -0.19
CCDC163-208ENST00000629670 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
CCDC163-208ENST00000629670 ZCCHC17Q9NP64 241 aaKnown RBP13.89□□□□□ -0.19
CCDC163-208ENST00000629670 DENND2AQ9ULE3 1009 aa13.89□□□□□ -0.19
CCDC163-208ENST00000629670 ARAP2Q8WZ64 1704 aa13.89□□□□□ -0.19
CCDC163-208ENST00000629670 PPIL2Q13356 520 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms