RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 LCE2BO14633 110 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 ZBTB7BO15156 539 aaPredicted RBP6.93□□□□□ -1.3
LINC00550-202ENST00000629570 TAF5LO75529 589 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 GNAI2P04899 355 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 RRP1P56182 461 aaKnown RBP6.93□□□□□ -1.3
LINC00550-202ENST00000629570 PTPN12Q05209 780 aaKnown RBP6.93□□□□□ -1.3
LINC00550-202ENST00000629570 CHRNDQ07001 517 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 KIAA2012Q0VF49 1180 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 WASHC4Q2M389 1173 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 LRRC24Q50LG9 513 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 PPP1R18Q6NYC8 613 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 LDHAL6AQ6ZMR3 332 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 SUPT20HQ8NEM7 779 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 HELBQ8NG08 1087 aaPredicted RBP6.93□□□□□ -1.3
LINC00550-202ENST00000629570 ZNF516Q92618 1163 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 CNNM1Q9NRU3 951 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 GGA1Q9UJY5 639 aa6.93□□□□□ -1.3
LINC00550-202ENST00000629570 PA2G4Q9UQ80 394 aaKnown RBP6.93□□□□□ -1.3
LINC00550-202ENST00000629570 DICER1Q9UPY3 1922 aaKnown RBP6.93□□□□□ -1.3
LINC00550-202ENST00000629570 PNMA6EA0A0J9YXQ4 647 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 YDJCA8MPS7 323 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 FZD9O00144 591 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 SRGAP3O43295 1099 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 GFRA3O60609 400 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 MS4A1P11836 297 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 ATP2B4P23634 1241 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 MTX1Q13505 466 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 PDE3AQ14432 1141 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 PADI6Q6TGC4 694 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 TXNRD3Q86VQ6 643 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 NIM1KQ8IY84 436 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.92□□□□□ -1.3
LINC00550-202ENST00000629570 TTC13Q8NBP0 860 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 ANKRD2Q9GZV1 360 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 SIL1Q9H173 461 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 DBNDD1Q9H9R9 158 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 NMRK2Q9NPI5 230 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 HDAC5Q9UQL6 1122 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 RIPOR2Q9Y4F9 1068 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 ZNF804BA4D1E1 1349 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 MED23Q9ULK4 1368 aa6.92□□□□□ -1.3
LINC00550-202ENST00000629570 GLTPD2A6NH11 291 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 EYA2O00167 538 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 ECE2O60344 883 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 DDNO94850 711 aaPredicted RBP6.91□□□□□ -1.3
LINC00550-202ENST00000629570 KCNJ4P48050 445 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 METTL24Q5JXM2 366 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 SWT1Q5T5J6 900 aaKnown RBP6.91□□□□□ -1.3
LINC00550-202ENST00000629570 CEP85Q6P2H3 762 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 ATG9AQ7Z3C6 839 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 VGLL2Q8N8G2 317 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 EYA3Q99504 573 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 VPS33BQ9H267 617 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 GPBP1L1Q9HC44 474 aaPredicted RBP6.91□□□□□ -1.3
LINC00550-202ENST00000629570 COPRSQ9NQ92 184 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 NPDC1Q9NQX5 325 aaPredicted RBP6.91□□□□□ -1.3
LINC00550-202ENST00000629570 KCNQ5Q9NR82 932 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 ZBTB40Q9NUA8 1239 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 ZNRF3Q9ULT6 936 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 DDX19BQ9UMR2 479 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 LEMD3Q9Y2U8 911 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 MROH5Q6ZUA9 1318 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 IRS2Q9Y4H2 1338 aa6.91□□□□□ -1.3
LINC00550-202ENST00000629570 SCN9AQ15858 1988 aa6.9□□□□□ -1.3
LINC00550-202ENST00000629570 RAD17O75943 681 aa6.9□□□□□ -1.3
LINC00550-202ENST00000629570 CIAO1O76071 339 aa6.9□□□□□ -1.3
LINC00550-202ENST00000629570 CXCL9Q07325 125 aa6.9□□□□□ -1.3
LINC00550-202ENST00000629570 NKX2-3Q8TAU0 364 aa6.9□□□□□ -1.3
LINC00550-202ENST00000629570 ZC3H12CQ9C0D7 883 aaKnown RBP6.9□□□□□ -1.3
LINC00550-202ENST00000629570 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.9□□□□□ -1.3
LINC00550-202ENST00000629570 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.3
LINC00550-202ENST00000629570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.9□□□□□ -1.3
LINC00550-202ENST00000629570 KDM2BQ8NHM5 1336 aa6.9□□□□□ -1.3
LINC00550-202ENST00000629570 POTECB2RU33 542 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 PSMD14O00487 310 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 PDE8BO95263 885 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 IL15P40933 162 aaPredicted RBP6.89□□□□□ -1.31
LINC00550-202ENST00000629570 EIF6P56537 245 aaKnown RBP6.89□□□□□ -1.31
LINC00550-202ENST00000629570 ATP8B2P98198 1209 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 PUM3Q15397 648 aaKnown RBP6.89□□□□□ -1.31
LINC00550-202ENST00000629570 TRAF7Q6Q0C0 670 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 SIRT2Q8IXJ6 389 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 GPC2Q8N158 579 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 SSH3Q8TE77 659 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 V9GY48 417 aaPredicted RBP6.89□□□□□ -1.31
LINC00550-202ENST00000629570 WDR90Q96KV7 1748 aa6.89□□□□□ -1.31
LINC00550-202ENST00000629570 SHTN1A0MZ66 631 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 FGFR2P21802 821 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 GYG1P46976 350 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 GMPSP49915 693 aaPredicted RBP6.88□□□□□ -1.31
LINC00550-202ENST00000629570 SCNN1DP51172 638 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 COPS2P61201 443 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 TFCP2Q12800 502 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 UBE4AQ14139 1066 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 CIAPIN1Q6FI81 312 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 C15orf52Q6ZUT6 534 aaKnown RBP6.88□□□□□ -1.31
LINC00550-202ENST00000629570 CRBNQ96SW2 442 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 MXD3Q9BW11 206 aa6.88□□□□□ -1.31
LINC00550-202ENST00000629570 COA1Q9GZY4 146 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms