RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 EPHX2P34913 555 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 TIMM10P62072 90 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 GTF2IP78347 998 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 FOXK1P85037 733 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 G3BP1Q13283 466 aaKnown RBP eCLIP11.45□□□□□ -0.588e-10■■■□□ 14.9
SPTAN1-218ENST00000629137 DSG2Q14126 1118 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 ATP2B3Q16720 1220 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 FBXO33Q7Z6M2 555 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 RPAP2Q8IXW5 612 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 LPIN2Q92539 896 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 EXOC6BQ9Y2D4 811 aa11.45□□□□□ -0.58
SPTAN1-218ENST00000629137 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 A0A1B0GUL7 405 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 TOMM70O94826 608 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 SLC34A2O95436 690 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 EGFRP00533 1210 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 IFIT1P09914 478 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 SLC5A1P13866 664 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 LMOD1P29536 600 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 EAPPQ56P03 285 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 TTLL5Q6EMB2 1281 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 PLPP6Q8IY26 295 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 TDRD7Q8NHU6 1098 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 GMLQ99445 158 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 CHMP4BQ9H444 224 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 CNOT7Q9UIV1 285 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-218ENST00000629137 ZNF609O15014 1411 aa11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 RPS12P25398 132 aaKnown RBP11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 OS9Q13438 667 aaPredicted RBP11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 CAVIN4Q5BKX8 364 aa11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 STRIP1Q5VSL9 837 aa11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 CERS5Q8N5B7 392 aa11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 DPF2Q92785 391 aa11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 PCDHB15Q9Y5E8 787 aa11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 PCDHGA4Q9Y5G9 962 aa11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 COL1A1P02452 1464 aaPredicted RBP11.43□□□□□ -0.58
SPTAN1-218ENST00000629137 PHKA1P46020 1223 aa11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 HIRAP54198 1017 aaPredicted RBP11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 IRX6P78412 446 aaPredicted RBP11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 SAMD7Q7Z3H4 446 aa11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 VPS37DQ86XT2 251 aa11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 AGBL3Q8NEM8 1001 aa11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 EXOC6Q8TAG9 804 aa11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 TRPM4Q8TD43 1214 aa11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 NEUROD6Q96NK8 337 aa11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 ADARB2Q9NS39 739 aaKnown RBP11.42□□□□□ -0.58
SPTAN1-218ENST00000629137 APBB1O00213 710 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 NUDT7P0C024 238 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 C1QTNF8P60827 252 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 CHAF1AQ13111 956 aaPredicted RBP11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 GRIK5Q16478 980 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 TBC1D10BQ4KMP7 808 aaPredicted RBP11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 TNNI3KQ59H18 835 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 RBM26Q5T8P6 1007 aaKnown RBP11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 KIAA0825Q8IV33 1275 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 XAGE2Q96GT9 111 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 CRISPLD2Q9H0B8 497 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 TLR7Q9NYK1 1049 aaKnown RBP11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 AKAP2Q9Y2D5 859 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 FPGT-TNNI3KV9GXZ4 949 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 CEP350Q5VT06 3117 aa11.41□□□□□ -0.58
SPTAN1-218ENST00000629137 FAM205AQ6ZU69 1335 aa11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 MYO3BQ8WXR4 1341 aa11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 F8W031 263 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 H7C1D1 291 aa11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 HMMRO75330 724 aa11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 USP17L8P0C7I0 530 aa11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 ZNF280AP59817 542 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 MAP1SQ66K74 1059 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 CCDC102BQ68D86 513 aa11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 USP50Q70EL3 339 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 PNMA8AQ86V59 439 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 EAF2Q96CJ1 260 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 IL1RAPL2Q9NP60 686 aa11.4□□□□□ -0.58
SPTAN1-218ENST00000629137 ASTN2O75129 1339 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 MYH13Q9UKX3 1938 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 MFSD14BQ5SR56 506 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 SMC1BQ8NDV3 1235 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 RHPN1Q8TCX5 695 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 DBNDD2Q9BQY9 259 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 CCDC8Q9H0W5 538 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 BCL11AQ9H165 835 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 MYOZ2Q9NPC6 264 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 GPR108Q9NPR9 543 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 PCDHAC2Q9Y5I4 1007 aa11.39□□□□□ -0.59
SPTAN1-218ENST00000629137 FKBP1AP62942 108 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-218ENST00000629137 RASGRF1Q13972 1273 aa11.38□□□□□ -0.59
SPTAN1-218ENST00000629137 SCARF1Q14162 830 aa11.38□□□□□ -0.59
SPTAN1-218ENST00000629137 KIF4BQ2VIQ3 1234 aa11.38□□□□□ -0.59
SPTAN1-218ENST00000629137 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms