RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 NFXL1Q6ZNB6 911 aa14.76□□□□□ -0.05
SYNGAP1-207ENST00000628646 TEX11Q8IYF3 940 aa14.76□□□□□ -0.05
SYNGAP1-207ENST00000628646 TEKT1Q969V4 418 aa14.76□□□□□ -0.05
SYNGAP1-207ENST00000628646 POLLQ9UGP5 575 aa14.76□□□□□ -0.05
SYNGAP1-207ENST00000628646 HAND2P61296 217 aa14.76□□□□□ -0.05
SYNGAP1-207ENST00000628646 CHMP4CQ96CF2 233 aa14.76□□□□□ -0.05
SYNGAP1-207ENST00000628646 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 MPHOSPH10O00566 681 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 KLRK1P26718 216 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 GAS2L3Q86XJ1 694 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 IMMTQ16891 758 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 MCMDC2Q4G0Z9 681 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 SYNE3Q6ZMZ3 975 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 PAXIP1Q6ZW49 1069 aaPredicted RBP14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 ZNF532Q9HCE3 1301 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 SEMA3EO15041 775 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 PLCG2P16885 1265 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 PANK2Q9BZ23 570 aa14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 RTN4Q9NQC3 1192 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-207ENST00000628646 CRY2Q49AN0 593 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 HAUS7Q99871 368 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 GZF1Q9H116 711 aaPredicted RBP14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 MYH14Q7Z406 1995 aaKnown RBP14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 MCAMP43121 646 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 NUCB2P80303 420 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 TCP10Q12799 353 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 SKOR2Q2VWA4 1001 aaPredicted RBP14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 ARMT1Q9H993 441 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 ZNF408Q9H9D4 720 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 ZNRF3Q9ULT6 936 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 DHX16O60231 1041 aaKnown RBP14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 BAG4O95429 457 aaKnown RBP14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 HLA-DOAP06340 250 aa14.74□□□□□ -0.05
SYNGAP1-207ENST00000628646 CCDC129Q6ZRS4 1044 aa14.73□□□□□ -0.05
SYNGAP1-207ENST00000628646 MCM9Q9NXL9 1143 aa14.73□□□□□ -0.05
SYNGAP1-207ENST00000628646 DIXDC1Q155Q3 683 aa14.73□□□□□ -0.05
SYNGAP1-207ENST00000628646 TXNRD3Q86VQ6 643 aa14.73□□□□□ -0.05
SYNGAP1-207ENST00000628646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-207ENST00000628646 ZNF213O14771 459 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 LMNB1P20700 586 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 C9orf131Q5VYM1 1079 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 WTIPA6NIX2 430 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 PDE6AP16499 860 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 PRDX5P30044 214 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 APPBP2Q92624 585 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 FAM227BQ96M60 508 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 SAP30BPQ9UHR5 308 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 SART3Q15020 963 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 USP40Q9NVE5 1235 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 CLRN2A0PK11 232 aa14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 RANBP6O60518 1105 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-207ENST00000628646 CUL4AQ13619 759 aa14.71□□□□□ -0.05
SYNGAP1-207ENST00000628646 SCARF1Q14162 830 aa14.71□□□□□ -0.05
SYNGAP1-207ENST00000628646 USP17L8P0C7I0 530 aa14.71□□□□□ -0.05
SYNGAP1-207ENST00000628646 TNNI2P48788 182 aa14.71□□□□□ -0.05
SYNGAP1-207ENST00000628646 IKQ13123 557 aaPredicted RBP14.71□□□□□ -0.05
SYNGAP1-207ENST00000628646 GRM1Q13255 1194 aa14.71□□□□□ -0.06
SYNGAP1-207ENST00000628646 PRKG1Q13976 671 aa14.71□□□□□ -0.06
SYNGAP1-207ENST00000628646 ZNF444Q8N0Y2 327 aaPredicted RBP14.71□□□□□ -0.06
SYNGAP1-207ENST00000628646 GOLGA6L3A6NEY3 463 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 GPAA1O43292 621 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 MAPKAPK5Q8IW41 473 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 MXD3Q9BW11 206 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 ZNF287Q9HBT7 754 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 CTDP1Q9Y5B0 961 aaPredicted RBP14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 LAMB4A4D0S4 1761 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 ARFGEF2Q9Y6D5 1785 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 PSMA5P28066 241 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 TBC1D10BQ4KMP7 808 aaPredicted RBP14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 NF2P35240 595 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 BTDP43251 543 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 ANAPC15P60006 121 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 KIAA2012Q0VF49 1180 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 TGFBRAP1Q8WUH2 860 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 PIH1D3Q9NQM4 214 aaKnown RBP14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 SHANK3Q9BYB0 1731 aa14.7□□□□□ -0.06
SYNGAP1-207ENST00000628646 TCP10L2B9ZVM9 353 aa14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 EPB41L2O43491 1005 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 UBR2Q8IWV8 1755 aa14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 RTL9Q8NET4 1388 aa14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 SEC62Q99442 399 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 LMBRD1Q9NUN5 540 aa14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 JAKMIP1Q96N16 626 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 UBAC1Q9BSL1 405 aa14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 CWC22Q9HCG8 908 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 HSPA4P34932 840 aa14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 TMX3Q96JJ7 454 aa14.69□□□□□ -0.06
SYNGAP1-207ENST00000628646 NEK4P51957 841 aa14.68□□□□□ -0.06
SYNGAP1-207ENST00000628646 CCDC171Q6TFL3 1326 aa14.68□□□□□ -0.06
SYNGAP1-207ENST00000628646 PAPPAQ13219 1627 aa14.68□□□□□ -0.06
SYNGAP1-207ENST00000628646 GNAT2P19087 354 aa14.68□□□□□ -0.06
SYNGAP1-207ENST00000628646 MECOMQ03112 1051 aa14.68□□□□□ -0.06
SYNGAP1-207ENST00000628646 FAM43AQ8N2R8 423 aa14.68□□□□□ -0.06
SYNGAP1-207ENST00000628646 CICQ96RK0 1608 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 PSMD14O00487 310 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
SYNGAP1-207ENST00000628646 LSG1Q9H089 658 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms