RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 PPP1R12BO60237 982 aaPredicted RBP15.1■□□□□ 0.01
UBR1-212ENST00000627960 BCAR3O75815 825 aa15.1■□□□□ 0.01
UBR1-212ENST00000627960 GNAI3P08754 354 aa15.1■□□□□ 0.01
UBR1-212ENST00000627960 TM4SF4P48230 202 aa15.1■□□□□ 0.01
UBR1-212ENST00000627960 HDLBPQ00341 1268 aaKnown RBP15.1■□□□□ 0.01
UBR1-212ENST00000627960 RASA3Q14644 834 aa15.1■□□□□ 0.01
UBR1-212ENST00000627960 NBPF12Q5TAG4 269 aaPredicted RBP15.1■□□□□ 0.01
UBR1-212ENST00000627960 TDRD3Q9H7E2 651 aaKnown RBP15.1■□□□□ 0.01
UBR1-212ENST00000627960 CEP126Q9P2H0 1117 aa15.1■□□□□ 0.01
UBR1-212ENST00000627960 IL15P40933 162 aaPredicted RBP15.09■□□□□ 0.01
UBR1-212ENST00000627960 TNFAIP1Q13829 316 aa15.09■□□□□ 0.01
UBR1-212ENST00000627960 ATF7IPQ6VMQ6 1270 aa15.09■□□□□ 0.01
UBR1-212ENST00000627960 MRIQ9BWK5 157 aa15.09■□□□□ 0.01
UBR1-212ENST00000627960 COPRSQ9NQ92 184 aa15.09■□□□□ 0.01
UBR1-212ENST00000627960 UNCXA6NJT0 531 aa15.08■□□□□ 0
UBR1-212ENST00000627960 TRIM27P14373 513 aa15.08■□□□□ 0
UBR1-212ENST00000627960 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
UBR1-212ENST00000627960 MKRN3Q13064 507 aaKnown RBP15.08■□□□□ 0
UBR1-212ENST00000627960 ATP2B3Q16720 1220 aa15.08■□□□□ 0
UBR1-212ENST00000627960 SPRYD7Q5W111 196 aa15.08■□□□□ 0
UBR1-212ENST00000627960 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0
UBR1-212ENST00000627960 TEKT1Q969V4 418 aa15.08■□□□□ 0
UBR1-212ENST00000627960 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
UBR1-212ENST00000627960 MCOLN1Q9GZU1 580 aa15.08■□□□□ 0
UBR1-212ENST00000627960 PA2G4Q9UQ80 394 aaKnown RBP15.08■□□□□ 0
UBR1-212ENST00000627960 TNNQ9UQP3 1299 aa15.08■□□□□ 0
UBR1-212ENST00000627960 SUGT1Q9Y2Z0 365 aa15.08■□□□□ 0
UBR1-212ENST00000627960 USP2O75604 605 aaPredicted RBP15.07■□□□□ 0
UBR1-212ENST00000627960 DGKZQ13574 1117 aa15.07■□□□□ 0
UBR1-212ENST00000627960 WDR66Q8TBY9 1149 aa15.07■□□□□ 0
UBR1-212ENST00000627960 LAMB1P07942 1786 aa15.06■□□□□ 0
UBR1-212ENST00000627960 TCP10L2B9ZVM9 353 aa15.06■□□□□ 0
UBR1-212ENST00000627960 IREB2P48200 963 aaKnown RBP15.06■□□□□ 0
UBR1-212ENST00000627960 TNNI2P48788 182 aa15.06■□□□□ 0
UBR1-212ENST00000627960 SREBF2Q12772 1141 aa15.06■□□□□ 0
UBR1-212ENST00000627960 MTX1Q13505 466 aa15.06■□□□□ 0
UBR1-212ENST00000627960 CLMNQ96JQ2 1002 aa15.06■□□□□ 0
UBR1-212ENST00000627960 ZDHHC15Q96MV8 337 aa15.06■□□□□ 0
UBR1-212ENST00000627960 TEPSINQ96N21 525 aa15.06■□□□□ 0
UBR1-212ENST00000627960 GNL3LQ9NVN8 582 aaKnown RBP15.06■□□□□ 0
UBR1-212ENST00000627960 MAST3O60307 1309 aa15.06■□□□□ 0
UBR1-212ENST00000627960 SRGAP3O43295 1099 aa15.05■□□□□ -0
UBR1-212ENST00000627960 HHIPL2Q6UWX4 724 aa15.05■□□□□ -0
UBR1-212ENST00000627960 CLUAP1Q96AJ1 413 aa15.05■□□□□ -0
UBR1-212ENST00000627960 WNK4Q96J92 1243 aa15.05■□□□□ -0
UBR1-212ENST00000627960 OTOFQ9HC10 1997 aa15.05■□□□□ -0
UBR1-212ENST00000627960 CCDC85CA6NKD9 419 aa15.04■□□□□ -0
UBR1-212ENST00000627960 ZBTB22O15209 634 aa15.04■□□□□ -0
UBR1-212ENST00000627960 TBC1D8O95759 1140 aa15.04■□□□□ -0
UBR1-212ENST00000627960 GNAI2P04899 355 aa15.04■□□□□ -0
UBR1-212ENST00000627960 ZBTB48P10074 688 aaPredicted RBP15.04■□□□□ -0
UBR1-212ENST00000627960 ZKSCAN2Q63HK3 967 aa15.04■□□□□ -0
UBR1-212ENST00000627960 APOBEC3HQ6NTF7 200 aaKnown RBP15.04■□□□□ -0
UBR1-212ENST00000627960 CDAN1Q8IWY9 1227 aa15.04■□□□□ -0
UBR1-212ENST00000627960 ANKRD13AQ8IZ07 590 aa15.04■□□□□ -0
UBR1-212ENST00000627960 TMEM39BQ9GZU3 492 aa15.04■□□□□ -0
UBR1-212ENST00000627960 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
UBR1-212ENST00000627960 MANSC4A6NHS7 340 aaPredicted RBP15.03■□□□□ -0
UBR1-212ENST00000627960 SEMA3EO15041 775 aa15.03■□□□□ -0
UBR1-212ENST00000627960 PHKA1P46020 1223 aa15.03■□□□□ -0
UBR1-212ENST00000627960 CACNB3P54284 484 aa15.03■□□□□ -0
UBR1-212ENST00000627960 INHBEP58166 350 aa15.03■□□□□ -0
UBR1-212ENST00000627960 FKBP1CQ5VVH2 108 aa15.03■□□□□ -0
UBR1-212ENST00000627960 DENND2AQ9ULE3 1009 aa15.03■□□□□ -0
UBR1-212ENST00000627960 SALL1Q9NSC2 1324 aa15.02■□□□□ -0
UBR1-212ENST00000627960 ADORA1P30542 326 aa15.02■□□□□ -0
UBR1-212ENST00000627960 TIMM10P62072 90 aa15.02■□□□□ -0
UBR1-212ENST00000627960 TFCP2Q12800 502 aa15.02■□□□□ -0
UBR1-212ENST00000627960 FAM83AQ86UY5 434 aa15.02■□□□□ -0
UBR1-212ENST00000627960 TMEM57Q8N5G2 664 aa15.02■□□□□ -0
UBR1-212ENST00000627960 CFHR5Q9BXR6 569 aa15.02■□□□□ -0
UBR1-212ENST00000627960 TMOD2Q9NZR1 351 aa15.02■□□□□ -0
UBR1-212ENST00000627960 AKAP2Q9Y2D5 859 aa15.02■□□□□ -0
UBR1-212ENST00000627960 ALDH1A1P00352 501 aa15.01□□□□□ -0.01
UBR1-212ENST00000627960 LDHBP07195 334 aaKnown RBP15.01□□□□□ -0.01
UBR1-212ENST00000627960 GJA5P36382 358 aa15.01□□□□□ -0.01
UBR1-212ENST00000627960 NOM1Q5C9Z4 860 aaKnown RBP15.01□□□□□ -0.01
UBR1-212ENST00000627960 CCDC102BQ68D86 513 aa15.01□□□□□ -0.01
UBR1-212ENST00000627960 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.01□□□□□ -0.01
UBR1-212ENST00000627960 CTU1Q7Z7A3 348 aaKnown RBP15.01□□□□□ -0.01
UBR1-212ENST00000627960 IFNL1Q8IU54 200 aa15.01□□□□□ -0.01
UBR1-212ENST00000627960 ZNF296Q8WUU4 475 aaPredicted RBP15.01□□□□□ -0.01
UBR1-212ENST00000627960 AK9Q5TCS8 1911 aa15.01□□□□□ -0.01
UBR1-212ENST00000627960 MYH2Q9UKX2 1941 aa15.01□□□□□ -0.01
UBR1-212ENST00000627960 A0A1B0GUL7 405 aa15□□□□□ -0.01
UBR1-212ENST00000627960 GPR25O00155 361 aa15□□□□□ -0.01
UBR1-212ENST00000627960 PRDX5P30044 214 aa15□□□□□ -0.01
UBR1-212ENST00000627960 MAP3K9P80192 1104 aa15□□□□□ -0.01
UBR1-212ENST00000627960 DIXDC1Q155Q3 683 aa15□□□□□ -0.01
UBR1-212ENST00000627960 XAGE2Q96GT9 111 aa15□□□□□ -0.01
UBR1-212ENST00000627960 ELP3Q9H9T3 547 aa15□□□□□ -0.01
UBR1-212ENST00000627960 DAGLAQ9Y4D2 1042 aa15□□□□□ -0.01
UBR1-212ENST00000627960 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
UBR1-212ENST00000627960 PNMA6EA0A0J9YXQ4 647 aa14.99□□□□□ -0.01
UBR1-212ENST00000627960 CDC42EP5Q6NZY7 148 aa14.99□□□□□ -0.01
UBR1-212ENST00000627960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.99□□□□□ -0.01
UBR1-212ENST00000627960 HOOK2Q96ED9 719 aa14.99□□□□□ -0.01
UBR1-212ENST00000627960 R3HDMLQ9H3Y0 253 aa14.99□□□□□ -0.01
UBR1-212ENST00000627960 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.99□□□□□ -0.01
UBR1-212ENST00000627960 PDS5AQ29RF7 1337 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms