RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 RTN4Q9NQC3 1192 aaKnown RBP13.52□□□□□ -0.25
TCF4-253ENST00000626466 MKI67P46013 3256 aaKnown RBP13.52□□□□□ -0.25
TCF4-253ENST00000626466 FAM205AQ6ZU69 1335 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 TCP10L2B9ZVM9 353 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 MYO1BO43795 1136 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 GYG1P46976 350 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 FKBP1AP62942 108 aaKnown RBP13.51□□□□□ -0.25
TCF4-253ENST00000626466 IFIT5Q13325 482 aaKnown RBP13.51□□□□□ -0.25
TCF4-253ENST00000626466 VGLL4Q14135 290 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 LMBR1LQ6UX01 489 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 FAM43AQ8N2R8 423 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 ARHGAP39Q9C0H5 1083 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 MYH16Q9H6N6 1097 aa13.51□□□□□ -0.25
TCF4-253ENST00000626466 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
TCF4-253ENST00000626466 FANCIQ9NVI1 1328 aa13.5□□□□□ -0.25
TCF4-253ENST00000626466 CCL15-CCL14A0A0B4J2E2 113 aa13.5□□□□□ -0.25
TCF4-253ENST00000626466 UNCXA6NJT0 531 aa13.5□□□□□ -0.25
TCF4-253ENST00000626466 CACNB3P54284 484 aa13.5□□□□□ -0.25
TCF4-253ENST00000626466 TAF1CQ15572 869 aaPredicted RBP13.5□□□□□ -0.25
TCF4-253ENST00000626466 CCL15Q16663 113 aa13.5□□□□□ -0.25
TCF4-253ENST00000626466 MFSD14BQ5SR56 506 aa13.5□□□□□ -0.25
TCF4-253ENST00000626466 BEND3Q5T5X7 828 aa13.5□□□□□ -0.25
TCF4-253ENST00000626466 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
TCF4-253ENST00000626466 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
TCF4-253ENST00000626466 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
TCF4-253ENST00000626466 DZIP1LQ8IYY4 767 aaKnown RBP13.49□□□□□ -0.25
TCF4-253ENST00000626466 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.49□□□□□ -0.25
TCF4-253ENST00000626466 TDRD7Q8NHU6 1098 aaKnown RBP13.49□□□□□ -0.25
TCF4-253ENST00000626466 SH3TC2Q8TF17 1288 aa13.49□□□□□ -0.25
TCF4-253ENST00000626466 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
TCF4-253ENST00000626466 CHMP4AQ9BY43 222 aa13.49□□□□□ -0.25
TCF4-253ENST00000626466 PUS3Q9BZE2 481 aaKnown RBP13.49□□□□□ -0.25
TCF4-253ENST00000626466 ARAP2Q8WZ64 1704 aa13.49□□□□□ -0.25
TCF4-253ENST00000626466 VAMP4O75379 141 aa13.48□□□□□ -0.25
TCF4-253ENST00000626466 CCDC27Q2M243 656 aa13.48□□□□□ -0.25
TCF4-253ENST00000626466 SLC9C1Q4G0N8 1177 aa13.48□□□□□ -0.25
TCF4-253ENST00000626466 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
TCF4-253ENST00000626466 IQSEC3Q9UPP2 1182 aaPredicted RBP13.48□□□□□ -0.25
TCF4-253ENST00000626466 SNCAIPQ9Y6H5 919 aa13.48□□□□□ -0.25
TCF4-253ENST00000626466 H0YGN5 161 aa13.47□□□□□ -0.25
TCF4-253ENST00000626466 CTGFP29279 349 aa13.47□□□□□ -0.25
TCF4-253ENST00000626466 CRKP46108 304 aa13.47□□□□□ -0.25
TCF4-253ENST00000626466 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
TCF4-253ENST00000626466 SHISA4Q96DD7 197 aa13.47□□□□□ -0.25
TCF4-253ENST00000626466 FAM84BQ96KN1 310 aaPredicted RBP13.47□□□□□ -0.25
TCF4-253ENST00000626466 CNNM1Q9NRU3 951 aa13.47□□□□□ -0.25
TCF4-253ENST00000626466 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
TCF4-253ENST00000626466 KIAA0100Q14667 2235 aaKnown RBP13.46□□□□□ -0.25
TCF4-253ENST00000626466 GRM8O00222 908 aa13.46□□□□□ -0.25
TCF4-253ENST00000626466 EXOSC9Q06265 439 aaKnown RBP13.46□□□□□ -0.25
TCF4-253ENST00000626466 TNFAIP1Q13829 316 aa13.46□□□□□ -0.25
TCF4-253ENST00000626466 SLC4A8Q2Y0W8 1093 aa13.46□□□□□ -0.25
TCF4-253ENST00000626466 KAZALD1Q96I82 304 aa13.46□□□□□ -0.25
TCF4-253ENST00000626466 TMEM106CQ9BVX2 250 aa13.46□□□□□ -0.25
TCF4-253ENST00000626466 ZFYVE28Q9HCC9 887 aa13.46□□□□□ -0.25
TCF4-253ENST00000626466 IL16Q14005 1332 aa13.45□□□□□ -0.26
TCF4-253ENST00000626466 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
TCF4-253ENST00000626466 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
TCF4-253ENST00000626466 HIBADHP31937 336 aaKnown RBP13.45□□□□□ -0.26
TCF4-253ENST00000626466 GTF2A2P52657 109 aa13.45□□□□□ -0.26
TCF4-253ENST00000626466 CHAF1AQ13111 956 aaPredicted RBP13.45□□□□□ -0.26
TCF4-253ENST00000626466 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
TCF4-253ENST00000626466 TAF7LQ5H9L4 462 aa13.45□□□□□ -0.26
TCF4-253ENST00000626466 SUCLG2Q96I99 432 aa13.45□□□□□ -0.26
TCF4-253ENST00000626466 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
TCF4-253ENST00000626466 LACTBP83111 547 aaPredicted RBP13.44□□□□□ -0.26
TCF4-253ENST00000626466 UBE4AQ14139 1066 aa13.44□□□□□ -0.26
TCF4-253ENST00000626466 MTFR1Q15390 333 aa13.44□□□□□ -0.26
TCF4-253ENST00000626466 ZKSCAN4Q969J2 545 aaPredicted RBP13.44□□□□□ -0.26
TCF4-253ENST00000626466 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
TCF4-253ENST00000626466 CSADQ9Y600 493 aa13.44□□□□□ -0.26
TCF4-253ENST00000626466 BRCA2P51587 3418 aa13.44□□□□□ -0.26
TCF4-253ENST00000626466 CENPFP49454 3210 aa13.44□□□□□ -0.26
TCF4-253ENST00000626466 IRF6O14896 467 aa13.43□□□□□ -0.26
TCF4-253ENST00000626466 TLR2O60603 784 aa13.43□□□□□ -0.26
TCF4-253ENST00000626466 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
TCF4-253ENST00000626466 FBXO33Q7Z6M2 555 aa13.43□□□□□ -0.26
TCF4-253ENST00000626466 WRNIP1Q96S55 665 aa13.43□□□□□ -0.26
TCF4-253ENST00000626466 RIPOR2Q9Y4F9 1068 aa13.43□□□□□ -0.26
TCF4-253ENST00000626466 INPP5BP32019 993 aa13.42□□□□□ -0.26
TCF4-253ENST00000626466 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
TCF4-253ENST00000626466 CPA4Q9UI42 421 aa13.42□□□□□ -0.26
TCF4-253ENST00000626466 ADGRA2Q96PE1 1338 aa13.41□□□□□ -0.26
TCF4-253ENST00000626466 NBPF7P0C2Y1 421 aaPredicted RBP13.41□□□□□ -0.26
TCF4-253ENST00000626466 CETPP11597 493 aa13.41□□□□□ -0.26
TCF4-253ENST00000626466 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
TCF4-253ENST00000626466 NBPF11Q86T75 865 aa13.41□□□□□ -0.26
TCF4-253ENST00000626466 ERO1BQ86YB8 467 aa13.41□□□□□ -0.26
TCF4-253ENST00000626466 VGLL2Q8N8G2 317 aa13.41□□□□□ -0.26
TCF4-253ENST00000626466 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.41□□□□□ -0.26
TCF4-253ENST00000626466 TRIM47Q96LD4 638 aa13.41□□□□□ -0.26
TCF4-253ENST00000626466 TNNI2P48788 182 aa13.4□□□□□ -0.26
TCF4-253ENST00000626466 SNAPC2Q13487 334 aa13.4□□□□□ -0.26
TCF4-253ENST00000626466 SLC4A10Q6U841 1118 aa13.4□□□□□ -0.26
TCF4-253ENST00000626466 C17orf99Q6UX52 265 aa13.4□□□□□ -0.26
TCF4-253ENST00000626466 MIGA2Q7L4E1 593 aa13.4□□□□□ -0.26
TCF4-253ENST00000626466 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
TCF4-253ENST00000626466 KLHDC4Q8TBB5 520 aa13.4□□□□□ -0.26
TCF4-253ENST00000626466 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
TCF4-253ENST00000626466 C9orf78Q9NZ63 289 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms