RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
SOX2-OT-238ENST00000626299 CRKP46108 304 aa16.67■□□□□ 0.26
SOX2-OT-238ENST00000626299 RBM5P52756 815 aaKnown RBP eCLIP16.67■□□□□ 0.26
SOX2-OT-238ENST00000626299 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
SOX2-OT-238ENST00000626299 SULF1Q8IWU6 871 aa16.67■□□□□ 0.26
SOX2-OT-238ENST00000626299 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
SOX2-OT-238ENST00000626299 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
SOX2-OT-238ENST00000626299 HDLBPQ00341 1268 aaKnown RBP16.66■□□□□ 0.26
SOX2-OT-238ENST00000626299 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
SOX2-OT-238ENST00000626299 CST9Q5W186 159 aa16.66■□□□□ 0.26
SOX2-OT-238ENST00000626299 CLASRPQ8N2M8 674 aaKnown RBP16.66■□□□□ 0.26
SOX2-OT-238ENST00000626299 ZNF512BQ96KM6 892 aaPredicted RBP16.66■□□□□ 0.26
SOX2-OT-238ENST00000626299 CREBZFQ9NS37 354 aa16.66■□□□□ 0.26
SOX2-OT-238ENST00000626299 MAST3O60307 1309 aa16.66■□□□□ 0.26
SOX2-OT-238ENST00000626299 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 TMEM88BA6NKF7 163 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 DIXDC1Q155Q3 683 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 LRRCC1Q9C099 1032 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 SNRKQ9NRH2 765 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
SOX2-OT-238ENST00000626299 SMARCA5O60264 1052 aaPredicted RBP16.64■□□□□ 0.25
SOX2-OT-238ENST00000626299 CELF2O95319 508 aaKnown RBP16.64■□□□□ 0.25
SOX2-OT-238ENST00000626299 AAMPQ13685 434 aa16.64■□□□□ 0.25
SOX2-OT-238ENST00000626299 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
SOX2-OT-238ENST00000626299 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
SOX2-OT-238ENST00000626299 ZNF408Q9H9D4 720 aa16.64■□□□□ 0.25
SOX2-OT-238ENST00000626299 MYO1BO43795 1136 aa16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 HHIPL2Q6UWX4 724 aa16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 CDCA5Q96FF9 252 aa16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 TDRD3Q9H7E2 651 aaKnown RBP16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 DAGLAQ9Y4D2 1042 aa16.63■□□□□ 0.25
SOX2-OT-238ENST00000626299 CYP2E1P05181 493 aaPredicted RBP16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 ZAP70P43403 619 aa16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 DNAJC5GQ8N7S2 189 aa16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 ZNF384Q8TF68 577 aa16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 ZNF70Q9UC06 446 aaPredicted RBP16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 NDUFB9Q9Y6M9 179 aa16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 MYH13Q9UKX3 1938 aa16.62■□□□□ 0.25
SOX2-OT-238ENST00000626299 MECOMQ03112 1051 aa16.61■□□□□ 0.25
SOX2-OT-238ENST00000626299 SPTY2D1Q68D10 685 aaPredicted RBP16.61■□□□□ 0.25
SOX2-OT-238ENST00000626299 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
SOX2-OT-238ENST00000626299 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
SOX2-OT-238ENST00000626299 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
SOX2-OT-238ENST00000626299 PIH1D3Q9NQM4 214 aaKnown RBP16.6■□□□□ 0.25
SOX2-OT-238ENST00000626299 ABT1Q9ULW3 272 aaKnown RBP16.6■□□□□ 0.25
SOX2-OT-238ENST00000626299 GAKO14976 1311 aa16.6■□□□□ 0.25
SOX2-OT-238ENST00000626299 CACNB3P54284 484 aa16.59■□□□□ 0.25
SOX2-OT-238ENST00000626299 NSUN4Q96CB9 384 aaKnown RBP16.59■□□□□ 0.25
SOX2-OT-238ENST00000626299 RAI14Q9P0K7 980 aa16.59■□□□□ 0.25
SOX2-OT-238ENST00000626299 TLL2Q9Y6L7 1015 aa16.59■□□□□ 0.25
SOX2-OT-238ENST00000626299 RASSF10A6NK89 507 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 TCP10L2B9ZVM9 353 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 RASA3Q14644 834 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 SAPCD2Q86UD0 394 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 FAM163AQ96GL9 167 aaPredicted RBP16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 ANTXR1Q9H6X2 564 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 GBA2Q9HCG7 927 aaPredicted RBP16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 LRP2BPQ9P2M1 347 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 MKRN1Q9UHC7 482 aaKnown RBP16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 PPP2R3BQ9Y5P8 575 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 CNTNAP1P78357 1384 aa16.58■□□□□ 0.24
SOX2-OT-238ENST00000626299 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
SOX2-OT-238ENST00000626299 IGHDP01880 384 aa16.57■□□□□ 0.24
SOX2-OT-238ENST00000626299 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
SOX2-OT-238ENST00000626299 CDC42EP5Q6NZY7 148 aa16.57■□□□□ 0.24
SOX2-OT-238ENST00000626299 KLRG1Q96E93 195 aa16.57■□□□□ 0.24
SOX2-OT-238ENST00000626299 AKAP11Q9UKA4 1901 aa16.57■□□□□ 0.24
SOX2-OT-238ENST00000626299 CEP350Q5VT06 3117 aa16.56■□□□□ 0.24
SOX2-OT-238ENST00000626299 ATP5JP18859 108 aa16.56■□□□□ 0.24
SOX2-OT-238ENST00000626299 CDAN1Q8IWY9 1227 aa16.56■□□□□ 0.24
SOX2-OT-238ENST00000626299 SLF2Q8IX21 1173 aa16.56■□□□□ 0.24
SOX2-OT-238ENST00000626299 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
SOX2-OT-238ENST00000626299 GCC1Q96CN9 775 aa16.56■□□□□ 0.24
SOX2-OT-238ENST00000626299 TMEM39BQ9GZU3 492 aa16.56■□□□□ 0.24
SOX2-OT-238ENST00000626299 ECM29Q5VYK3 1845 aa16.56■□□□□ 0.24
SOX2-OT-238ENST00000626299 GPR75-ASB3A0A0A6YYF3 556 aa16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 BTDP43251 543 aa16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 GSTO1P78417 241 aa16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 NFIAQ12857 509 aa16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 DEFB115Q30KQ5 88 aa16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 NBPF12Q5TAG4 269 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 FKBP1CQ5VVH2 108 aa16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 OTUD7AQ8TE49 926 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-238ENST00000626299 EDC3Q96F86 508 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms