RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 USPL1Q5W0Q7 1092 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 E4F1Q66K89 784 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 NAA16Q6N069 864 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 C11orf57Q6ZUT1 292 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 RGS22Q8NE09 1264 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 ANKRD24Q8TF21 1146 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 RBM33Q96EV2 1170 aaKnown RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 CWC15Q9P013 229 aaKnown RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 TFIP11Q9UBB9 837 aaKnown RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 ORC3Q9UBD5 711 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 BCORQ6W2J9 1755 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 SOS2Q07890 1332 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 RFX7Q2KHR2 1363 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 SRGAP3O43295 1099 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 MYO1BO43795 1136 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 TPRNQ4KMQ1 711 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 PLEKHO1Q53GL0 409 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 FAM173BQ6P4H8 233 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 NBPF11Q86T75 865 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 FERMT3Q86UX7 667 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 TICAM2Q86XR7 235 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 CCAR1Q8IX12 1150 aaKnown RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 CEP57L1Q8IYX8 460 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 UBXN4Q92575 508 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 GTF3C6Q969F1 213 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 PPP1R13BQ96KQ4 1090 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 ZNF396Q96N95 335 aaPredicted RBP4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 MIS18AQ9NYP9 233 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 DNAI1Q9UI46 699 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 MED23Q9ULK4 1368 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 TNS2Q63HR2 1409 aa4.85□□□□□ -1.63
PTP4A1-205ENST00000626021 SPEF2Q9C093 1822 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 KDM4FA0A1W2PPD8 638 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 A0A1W2PQ27 194 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 A0A1W2PQ64 194 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 A0A1W2PQD8 194 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 ALDH1L1O75891 902 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 FAM160A1Q05DH4 1040 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 RAD51AP2Q09MP3 1159 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 ARID5BQ14865 1188 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 BEND3Q5T5X7 828 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 JAKMIP3Q5VZ66 844 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 ZNF530Q6P9A1 599 aaPredicted RBP4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 SYT10Q6XYQ8 523 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 THSD4Q6ZMP0 1018 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 CCDC73Q6ZRK6 1079 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 GPR161Q8N6U8 529 aaKnown RBP4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 USHBP1Q8N6Y0 703 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 FBXO18Q8NFZ0 1043 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 EXOC4Q96A65 974 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 TMX1Q9H3N1 280 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 TRMT1Q9NXH9 659 aaKnown RBP4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 CHMP3Q9Y3E7 222 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 USP16Q9Y5T5 823 aa4.84□□□□□ -1.63
PTP4A1-205ENST00000626021 GOLGA6L9A6NEM1 432 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 ERICH4A6NGS2 130 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 IKBKBO14920 756 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 RNMTO43148 476 aaKnown RBP4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 PFKFB2O60825 505 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 KINO60870 393 aaKnown RBP4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 TADA3O75528 432 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 RPS6KA5O75582 802 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 IFIT2P09913 472 aaKnown RBP4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 NLRP12P59046 1061 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 EIF4A1P60842 406 aaKnown RBP4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 TUBB4BP68371 445 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 ARHGAP29Q52LW3 1261 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 ADALQ6DHV7 355 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 TRIM65Q6PJ69 517 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 GOLGA5Q8TBA6 731 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 DNAAF4Q8WXU2 420 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 BRF1Q92994 677 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 LRRC59Q96AG4 307 aaKnown RBP4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 LTV1Q96GA3 475 aaPredicted RBP4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 MPHOSPH8Q99549 860 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 LHX6Q9UPM6 363 aa4.84□□□□□ -1.64
PTP4A1-205ENST00000626021 DDX60Q8IY21 1712 aaKnown RBP4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 H3BQV1 296 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 ZSCAN12O43309 604 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 CBFA2T2O43439 604 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 SFPQP23246 707 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 NMIQ13287 307 aaPredicted RBP4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 LRRFIP1Q32MZ4 808 aaKnown RBP4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 ARMCX5Q6P1M9 558 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 BRINP3Q76B58 766 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 REXO1L1PQ8IX06 675 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 FMR1NBQ8N0W7 255 aaPredicted RBP4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 AK7Q96M32 723 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 NEK1Q96PY6 1258 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 AGXT2Q9BYV1 514 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 RASSF4Q9H2L5 321 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 ST7Q9NRC1 585 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 DISP2A7MBM2 1401 aa4.83□□□□□ -1.64
PTP4A1-205ENST00000626021 VGLL3A8MV65 326 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 MAP2K7O14733 419 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 TAF5LO75529 589 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 TBC1D8O95759 1140 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 HMGB1P09429 215 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 NBPF7P0C2Y1 421 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms