RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
SOX2-OT-237ENST00000625581 DLK2Q6UY11 383 aa17.8■□□□□ 0.44
SOX2-OT-237ENST00000625581 SERPINA10Q9UK55 444 aa17.8■□□□□ 0.44
SOX2-OT-237ENST00000625581 UQCRFS1P1P0C7P4 283 aa17.79■□□□□ 0.44
SOX2-OT-237ENST00000625581 CRKP46108 304 aa17.79■□□□□ 0.44
SOX2-OT-237ENST00000625581 AAMPQ13685 434 aa17.79■□□□□ 0.44
SOX2-OT-237ENST00000625581 DLGAP5Q15398 846 aa17.79■□□□□ 0.44
SOX2-OT-237ENST00000625581 CDC37L1Q7L3B6 337 aa17.79■□□□□ 0.44
SOX2-OT-237ENST00000625581 SPATA5Q8NB90 893 aa17.79■□□□□ 0.44
SOX2-OT-237ENST00000625581 ZNF512BQ96KM6 892 aaPredicted RBP17.79■□□□□ 0.44
SOX2-OT-237ENST00000625581 PRMT6Q96LA8 375 aaPredicted RBP17.79■□□□□ 0.44
SOX2-OT-237ENST00000625581 MAST3O60307 1309 aa17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 IRX6P78412 446 aaPredicted RBP17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 HTRA3P83110 453 aa17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 HDLBPQ00341 1268 aaKnown RBP17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 CCDC158Q5M9N0 1113 aa17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 TTC39AQ5SRH9 613 aa17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 KRT26Q7Z3Y9 468 aa17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 USP48Q86UV5 1035 aa17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 CLASRPQ8N2M8 674 aaKnown RBP17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 DCPSQ96C86 337 aaKnown RBP17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 SCAF8Q9UPN6 1271 aaKnown RBP17.78■□□□□ 0.44
SOX2-OT-237ENST00000625581 SMARCA5O60264 1052 aaPredicted RBP17.77■□□□□ 0.44
SOX2-OT-237ENST00000625581 HDAC1Q13547 482 aaPredicted RBP17.77■□□□□ 0.44
SOX2-OT-237ENST00000625581 TEKT1Q969V4 418 aa17.77■□□□□ 0.44
SOX2-OT-237ENST00000625581 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
SOX2-OT-237ENST00000625581 DIXDC1Q155Q3 683 aa17.76■□□□□ 0.43
SOX2-OT-237ENST00000625581 CST9Q5W186 159 aa17.76■□□□□ 0.43
SOX2-OT-237ENST00000625581 SULF1Q8IWU6 871 aa17.76■□□□□ 0.43
SOX2-OT-237ENST00000625581 ZGPATQ8N5A5 531 aaKnown RBP17.76■□□□□ 0.43
SOX2-OT-237ENST00000625581 ZNF384Q8TF68 577 aa17.76■□□□□ 0.43
SOX2-OT-237ENST00000625581 ZDHHC15Q96MV8 337 aa17.76■□□□□ 0.43
SOX2-OT-237ENST00000625581 MRIQ9BWK5 157 aa17.76■□□□□ 0.43
SOX2-OT-237ENST00000625581 CLRN2A0PK11 232 aa17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 RBM5P52756 815 aaKnown RBP eCLIP17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 SPDYE2Q495Y8 402 aa17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 HHIPL2Q6UWX4 724 aa17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 SNRKQ9NRH2 765 aa17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 CREBZFQ9NS37 354 aa17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 ABCF2Q9UG63 623 aa17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 PAPPA2Q9BXP8 1791 aa17.75■□□□□ 0.43
SOX2-OT-237ENST00000625581 CDK5RAP2Q96SN8 1893 aa17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 TMEM88BA6NKF7 163 aa17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 CYP2E1P05181 493 aaPredicted RBP17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 ZAP70P43403 619 aa17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 APOBEC3HQ6NTF7 200 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 APOBEC3FQ8IUX4 373 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 DAGLAQ9Y4D2 1042 aa17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 MYH7P12883 1935 aa17.74■□□□□ 0.43
SOX2-OT-237ENST00000625581 GAKO14976 1311 aa17.73■□□□□ 0.43
SOX2-OT-237ENST00000625581 CDCA5Q96FF9 252 aa17.73■□□□□ 0.43
SOX2-OT-237ENST00000625581 TDRD3Q9H7E2 651 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-237ENST00000625581 ZNF70Q9UC06 446 aaPredicted RBP17.73■□□□□ 0.43
SOX2-OT-237ENST00000625581 NDUFB9Q9Y6M9 179 aa17.73■□□□□ 0.43
SOX2-OT-237ENST00000625581 SSC5DA1L4H1 1573 aa17.73■□□□□ 0.43
SOX2-OT-237ENST00000625581 FOCADQ5VW36 1801 aa17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 MYO1BO43795 1136 aa17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 CELF2O95319 508 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 MECOMQ03112 1051 aa17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 SPTY2D1Q68D10 685 aaPredicted RBP17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 DZIP1Q86YF9 867 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 PIH1D3Q9NQM4 214 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 THSD7BQ9C0I4 1608 aa17.72■□□□□ 0.43
SOX2-OT-237ENST00000625581 ERICH6Q7L0X2 663 aa17.71■□□□□ 0.43
SOX2-OT-237ENST00000625581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
SOX2-OT-237ENST00000625581 NSUN4Q96CB9 384 aaKnown RBP17.71■□□□□ 0.43
SOX2-OT-237ENST00000625581 ZNF408Q9H9D4 720 aa17.71■□□□□ 0.43
SOX2-OT-237ENST00000625581 VEZTQ9HBM0 779 aa17.71■□□□□ 0.43
SOX2-OT-237ENST00000625581 OTOFQ9HC10 1997 aa17.71■□□□□ 0.43
SOX2-OT-237ENST00000625581 MROH7-TTC4A0A0A0MT08 1334 aa17.71■□□□□ 0.42
SOX2-OT-237ENST00000625581 CNTNAP1P78357 1384 aa17.7■□□□□ 0.42
SOX2-OT-237ENST00000625581 IGHDP01880 384 aa17.7■□□□□ 0.42
SOX2-OT-237ENST00000625581 PRAMEF18Q5VWM3 479 aa17.7■□□□□ 0.42
SOX2-OT-237ENST00000625581 DNAJC5GQ8N7S2 189 aa17.7■□□□□ 0.42
SOX2-OT-237ENST00000625581 GCC1Q96CN9 775 aa17.7■□□□□ 0.42
SOX2-OT-237ENST00000625581 FAM163AQ96GL9 167 aaPredicted RBP17.7■□□□□ 0.42
SOX2-OT-237ENST00000625581 ANTXR1Q9H6X2 564 aa17.7■□□□□ 0.42
SOX2-OT-237ENST00000625581 ATP5JP18859 108 aa17.69■□□□□ 0.42
SOX2-OT-237ENST00000625581 CACNB3P54284 484 aa17.69■□□□□ 0.42
SOX2-OT-237ENST00000625581 SMC5Q8IY18 1101 aa17.69■□□□□ 0.42
SOX2-OT-237ENST00000625581 DEFB129Q9H1M3 183 aa17.69■□□□□ 0.42
SOX2-OT-237ENST00000625581 PPP2R3BQ9Y5P8 575 aa17.69■□□□□ 0.42
SOX2-OT-237ENST00000625581 SALL3Q9BXA9 1300 aa17.69■□□□□ 0.42
SOX2-OT-237ENST00000625581 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
SOX2-OT-237ENST00000625581 OTUD7AQ8TE49 926 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-237ENST00000625581 RAI14Q9P0K7 980 aa17.68■□□□□ 0.42
SOX2-OT-237ENST00000625581 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
SOX2-OT-237ENST00000625581 TLL2Q9Y6L7 1015 aa17.68■□□□□ 0.42
SOX2-OT-237ENST00000625581 RASSF10A6NK89 507 aa17.67■□□□□ 0.42
SOX2-OT-237ENST00000625581 TCP10L2B9ZVM9 353 aa17.67■□□□□ 0.42
SOX2-OT-237ENST00000625581 RASA3Q14644 834 aa17.67■□□□□ 0.42
SOX2-OT-237ENST00000625581 SAPCD2Q86UD0 394 aa17.67■□□□□ 0.42
SOX2-OT-237ENST00000625581 CDAN1Q8IWY9 1227 aa17.67■□□□□ 0.42
SOX2-OT-237ENST00000625581 RWDD1Q9H446 243 aaPredicted RBP17.67■□□□□ 0.42
SOX2-OT-237ENST00000625581 GBA2Q9HCG7 927 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms