RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PTPN22Q9Y2R2 807 aa14.01□□□□□ -0.17
DDX41-218ENST00000625286 ALDH1L1O75891 902 aa14□□□□□ -0.17
DDX41-218ENST00000625286 IREB2P48200 963 aaKnown RBP14□□□□□ -0.17
DDX41-218ENST00000625286 LRRC24Q50LG9 513 aa14□□□□□ -0.17
DDX41-218ENST00000625286 SLC4A10Q6U841 1118 aa14□□□□□ -0.17
DDX41-218ENST00000625286 FBXO33Q7Z6M2 555 aa14□□□□□ -0.17
DDX41-218ENST00000625286 ANKRD13AQ8IZ07 590 aa14□□□□□ -0.17
DDX41-218ENST00000625286 ANKRD44Q8N8A2 993 aa14□□□□□ -0.17
DDX41-218ENST00000625286 BRI3BPQ8WY22 251 aa14□□□□□ -0.17
DDX41-218ENST00000625286 OPTNQ96CV9 577 aa14□□□□□ -0.17
DDX41-218ENST00000625286 UTYO14607 1347 aa13.99□□□□□ -0.17
DDX41-218ENST00000625286 TCP10L2B9ZVM9 353 aa13.99□□□□□ -0.17
DDX41-218ENST00000625286 CRKP46108 304 aa13.99□□□□□ -0.17
DDX41-218ENST00000625286 CACNB3P54284 484 aa13.99□□□□□ -0.17
DDX41-218ENST00000625286 TAF7LQ5H9L4 462 aa13.99□□□□□ -0.17
DDX41-218ENST00000625286 SRCIN1Q9C0H9 1055 aa13.99□□□□□ -0.17
DDX41-218ENST00000625286 BICC1Q9H694 974 aaKnown RBP13.99□□□□□ -0.17
DDX41-218ENST00000625286 VGLL4Q14135 290 aa13.98□□□□□ -0.17
DDX41-218ENST00000625286 RABL6Q3YEC7 729 aaPredicted RBP13.98□□□□□ -0.17
DDX41-218ENST00000625286 VGLL2Q8N8G2 317 aa13.98□□□□□ -0.17
DDX41-218ENST00000625286 KLHDC4Q8TBB5 520 aa13.98□□□□□ -0.17
DDX41-218ENST00000625286 ARAP2Q8WZ64 1704 aa13.98□□□□□ -0.17
DDX41-218ENST00000625286 EN2P19622 333 aaPredicted RBP13.97□□□□□ -0.17
DDX41-218ENST00000625286 BCAMP50895 628 aa13.97□□□□□ -0.17
DDX41-218ENST00000625286 SP3Q02447 781 aa13.97□□□□□ -0.17
DDX41-218ENST00000625286 FAM43AQ8N2R8 423 aa13.97□□□□□ -0.17
DDX41-218ENST00000625286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.97□□□□□ -0.17
DDX41-218ENST00000625286 ZNF521Q96K83 1311 aa13.96□□□□□ -0.17
DDX41-218ENST00000625286 MAP3K9P80192 1104 aa13.96□□□□□ -0.17
DDX41-218ENST00000625286 MRPL50Q8N5N7 158 aaKnown RBP13.96□□□□□ -0.17
DDX41-218ENST00000625286 ARMC5Q96C12 935 aa13.96□□□□□ -0.17
DDX41-218ENST00000625286 ERO1AQ96HE7 468 aa13.96□□□□□ -0.17
DDX41-218ENST00000625286 EFCC1Q9HA90 598 aa13.96□□□□□ -0.17
DDX41-218ENST00000625286 ZSWIM8A7E2V4 1837 aa13.96□□□□□ -0.17
DDX41-218ENST00000625286 RBBP6Q7Z6E9 1792 aaKnown RBP13.96□□□□□ -0.18
DDX41-218ENST00000625286 MROH5Q6ZUA9 1318 aa13.95□□□□□ -0.18
DDX41-218ENST00000625286 CHAF1AQ13111 956 aaPredicted RBP13.95□□□□□ -0.18
DDX41-218ENST00000625286 TNFAIP1Q13829 316 aa13.95□□□□□ -0.18
DDX41-218ENST00000625286 INTS3Q68E01 1043 aaKnown RBP13.95□□□□□ -0.18
DDX41-218ENST00000625286 OTUD7BQ6GQQ9 843 aa13.95□□□□□ -0.18
DDX41-218ENST00000625286 APOBEC3HQ6NTF7 200 aaKnown RBP13.95□□□□□ -0.18
DDX41-218ENST00000625286 SNCAIPQ9Y6H5 919 aa13.95□□□□□ -0.18
DDX41-218ENST00000625286 CCL15-CCL14A0A0B4J2E2 113 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 CEP290O15078 2479 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 PDE8BO95263 885 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 FGFR2P21802 821 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 CCL15Q16663 113 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 ZKSCAN4Q969J2 545 aaPredicted RBP13.94□□□□□ -0.18
DDX41-218ENST00000625286 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 ARHGAP39Q9C0H5 1083 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
DDX41-218ENST00000625286 RFX5P48382 616 aaPredicted RBP13.93□□□□□ -0.18
DDX41-218ENST00000625286 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
DDX41-218ENST00000625286 METTL24Q5JXM2 366 aa13.93□□□□□ -0.18
DDX41-218ENST00000625286 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
DDX41-218ENST00000625286 ZDHHC15Q96MV8 337 aa13.93□□□□□ -0.18
DDX41-218ENST00000625286 MRIQ9BWK5 157 aa13.93□□□□□ -0.18
DDX41-218ENST00000625286 PTCH2Q9Y6C5 1203 aa13.93□□□□□ -0.18
DDX41-218ENST00000625286 SPDYE5A6NIY4 337 aa13.92□□□□□ -0.18
DDX41-218ENST00000625286 BTBD19C9JJ37 291 aa13.92□□□□□ -0.18
DDX41-218ENST00000625286 IRF6O14896 467 aa13.92□□□□□ -0.18
DDX41-218ENST00000625286 ANP32CO43423 234 aa13.92□□□□□ -0.18
DDX41-218ENST00000625286 CTGFP29279 349 aa13.92□□□□□ -0.18
DDX41-218ENST00000625286 GTF2A2P52657 109 aa13.92□□□□□ -0.18
DDX41-218ENST00000625286 TAF1CQ15572 869 aaPredicted RBP13.92□□□□□ -0.18
DDX41-218ENST00000625286 TNNI2P48788 182 aa13.91□□□□□ -0.18
DDX41-218ENST00000625286 HABP4Q5JVS0 413 aaKnown RBP13.91□□□□□ -0.18
DDX41-218ENST00000625286 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
DDX41-218ENST00000625286 SSH1Q8WYL5 1049 aa13.91□□□□□ -0.18
DDX41-218ENST00000625286 TEKT1Q969V4 418 aa13.91□□□□□ -0.18
DDX41-218ENST00000625286 ZFYVE28Q9HCC9 887 aa13.91□□□□□ -0.18
DDX41-218ENST00000625286 SZT2Q5T011 3432 aa13.9□□□□□ -0.18
DDX41-218ENST00000625286 CAVIN4Q5BKX8 364 aa13.9□□□□□ -0.18
DDX41-218ENST00000625286 MIGA2Q7L4E1 593 aa13.9□□□□□ -0.18
DDX41-218ENST00000625286 ATG9AQ7Z3C6 839 aa13.9□□□□□ -0.18
DDX41-218ENST00000625286 FAM83AQ86UY5 434 aa13.9□□□□□ -0.18
DDX41-218ENST00000625286 TBC1D22AQ8WUA7 517 aa13.9□□□□□ -0.18
DDX41-218ENST00000625286 WRNIP1Q96S55 665 aa13.9□□□□□ -0.18
DDX41-218ENST00000625286 CSADQ9Y600 493 aa13.9□□□□□ -0.18
DDX41-218ENST00000625286 TLR2O60603 784 aa13.89□□□□□ -0.19
DDX41-218ENST00000625286 FRAT2O75474 233 aaPredicted RBP13.89□□□□□ -0.19
DDX41-218ENST00000625286 INPP5BP32019 993 aa13.89□□□□□ -0.19
DDX41-218ENST00000625286 MOGSQ13724 837 aa13.89□□□□□ -0.19
DDX41-218ENST00000625286 FKBP1CQ5VVH2 108 aa13.89□□□□□ -0.19
DDX41-218ENST00000625286 HHIPL2Q6UWX4 724 aa13.89□□□□□ -0.19
DDX41-218ENST00000625286 ERO1BQ86YB8 467 aa13.89□□□□□ -0.19
DDX41-218ENST00000625286 SH3TC2Q8TF17 1288 aa13.89□□□□□ -0.19
DDX41-218ENST00000625286 RANBP2P49792 3224 aaKnown RBP13.88□□□□□ -0.19
DDX41-218ENST00000625286 ECM2O94769 699 aaPredicted RBP13.88□□□□□ -0.19
DDX41-218ENST00000625286 MYCP01106 439 aaPredicted RBP13.88□□□□□ -0.19
DDX41-218ENST00000625286 CETPP11597 493 aa13.88□□□□□ -0.19
DDX41-218ENST00000625286 LACTBP83111 547 aaPredicted RBP13.88□□□□□ -0.19
DDX41-218ENST00000625286 NFIAQ12857 509 aa13.88□□□□□ -0.19
DDX41-218ENST00000625286 PUM3Q15397 648 aaKnown RBP13.88□□□□□ -0.19
DDX41-218ENST00000625286 DIXDC1Q155Q3 683 aa13.88□□□□□ -0.19
DDX41-218ENST00000625286 ZFPM1Q8IX07 1006 aa13.88□□□□□ -0.19
DDX41-218ENST00000625286 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
DDX41-218ENST00000625286 ZNF316A6NFI3 1004 aaPredicted RBP13.87□□□□□ -0.19
DDX41-218ENST00000625286 EYA2O00167 538 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms