RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 EYA2O00167 538 aa17.18■□□□□ 0.34
USH1C-211ENST00000624811 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
USH1C-211ENST00000624811 IREB2P48200 963 aaKnown RBP17.18■□□□□ 0.34
USH1C-211ENST00000624811 SOX10P56693 466 aa17.18■□□□□ 0.34
USH1C-211ENST00000624811 PUM3Q15397 648 aaKnown RBP17.18■□□□□ 0.34
USH1C-211ENST00000624811 MAP3K11Q16584 847 aa17.18■□□□□ 0.34
USH1C-211ENST00000624811 SIL1Q9H173 461 aa17.18■□□□□ 0.34
USH1C-211ENST00000624811 GPR25O00155 361 aa17.17■□□□□ 0.34
USH1C-211ENST00000624811 USP2O75604 605 aaPredicted RBP17.17■□□□□ 0.34
USH1C-211ENST00000624811 IFIT1P09914 478 aaKnown RBP17.17■□□□□ 0.34
USH1C-211ENST00000624811 CACNB3P54284 484 aa17.17■□□□□ 0.34
USH1C-211ENST00000624811 TNFAIP1Q13829 316 aa17.17■□□□□ 0.34
USH1C-211ENST00000624811 TMEM39BQ9GZU3 492 aa17.17■□□□□ 0.34
USH1C-211ENST00000624811 SLC5A1P13866 664 aa17.16■□□□□ 0.34
USH1C-211ENST00000624811 FGFR2P21802 821 aa17.16■□□□□ 0.34
USH1C-211ENST00000624811 RGS19P49795 217 aa17.16■□□□□ 0.34
USH1C-211ENST00000624811 TBC1D22AQ8WUA7 517 aa17.16■□□□□ 0.34
USH1C-211ENST00000624811 ELP3Q9H9T3 547 aa17.16■□□□□ 0.34
USH1C-211ENST00000624811 MANSC4A6NHS7 340 aaPredicted RBP17.15■□□□□ 0.34
USH1C-211ENST00000624811 GJA5P36382 358 aa17.15■□□□□ 0.34
USH1C-211ENST00000624811 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
USH1C-211ENST00000624811 TEKT1Q969V4 418 aa17.15■□□□□ 0.34
USH1C-211ENST00000624811 TEPSINQ96N21 525 aa17.15■□□□□ 0.34
USH1C-211ENST00000624811 API5Q9BZZ5 524 aaKnown RBP17.15■□□□□ 0.34
USH1C-211ENST00000624811 LRRFIP2Q9Y608 721 aaKnown RBP17.15■□□□□ 0.34
USH1C-211ENST00000624811 AK9Q5TCS8 1911 aa17.14■□□□□ 0.33
USH1C-211ENST00000624811 CCER2I3L3R5 266 aa17.14■□□□□ 0.33
USH1C-211ENST00000624811 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
USH1C-211ENST00000624811 ZBTB48P10074 688 aaPredicted RBP17.14■□□□□ 0.33
USH1C-211ENST00000624811 TNNI2P48788 182 aa17.14■□□□□ 0.33
USH1C-211ENST00000624811 IFNL1Q8IU54 200 aa17.14■□□□□ 0.33
USH1C-211ENST00000624811 ANKRD13AQ8IZ07 590 aa17.14■□□□□ 0.33
USH1C-211ENST00000624811 LPIN2Q92539 896 aa17.14■□□□□ 0.33
USH1C-211ENST00000624811 HPS5Q9UPZ3 1129 aa17.14■□□□□ 0.33
USH1C-211ENST00000624811 FKTNO75072 461 aa17.13■□□□□ 0.33
USH1C-211ENST00000624811 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
USH1C-211ENST00000624811 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
USH1C-211ENST00000624811 ALDH1A1P00352 501 aa17.12■□□□□ 0.33
USH1C-211ENST00000624811 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
USH1C-211ENST00000624811 RARSP54136 660 aaKnown RBP17.12■□□□□ 0.33
USH1C-211ENST00000624811 HDLBPQ00341 1268 aaKnown RBP17.12■□□□□ 0.33
USH1C-211ENST00000624811 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
USH1C-211ENST00000624811 OPTNQ96CV9 577 aa17.12■□□□□ 0.33
USH1C-211ENST00000624811 MEIS3Q99687 375 aa17.12■□□□□ 0.33
USH1C-211ENST00000624811 TMOD2Q9NZR1 351 aa17.12■□□□□ 0.33
USH1C-211ENST00000624811 KIF16BQ96L93 1317 aa17.12■□□□□ 0.33
USH1C-211ENST00000624811 INHBEP58166 350 aa17.11■□□□□ 0.33
USH1C-211ENST00000624811 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
USH1C-211ENST00000624811 ZDHHC15Q96MV8 337 aa17.11■□□□□ 0.33
USH1C-211ENST00000624811 CEP126Q9P2H0 1117 aa17.11■□□□□ 0.33
USH1C-211ENST00000624811 MAST3O60307 1309 aa17.11■□□□□ 0.33
USH1C-211ENST00000624811 UNCXA6NJT0 531 aa17.1■□□□□ 0.33
USH1C-211ENST00000624811 CIAO1O76071 339 aa17.1■□□□□ 0.33
USH1C-211ENST00000624811 VGLL4Q14135 290 aa17.1■□□□□ 0.33
USH1C-211ENST00000624811 APOBEC3HQ6NTF7 200 aaKnown RBP17.1■□□□□ 0.33
USH1C-211ENST00000624811 CFHR5Q9BXR6 569 aa17.1■□□□□ 0.33
USH1C-211ENST00000624811 MAP3K9P80192 1104 aa17.09■□□□□ 0.33
USH1C-211ENST00000624811 CRHR2Q13324 411 aa17.09■□□□□ 0.33
USH1C-211ENST00000624811 DIXDC1Q155Q3 683 aa17.09■□□□□ 0.33
USH1C-211ENST00000624811 PKN2Q16513 984 aaKnown RBP17.09■□□□□ 0.33
USH1C-211ENST00000624811 NOM1Q5C9Z4 860 aaKnown RBP17.09■□□□□ 0.33
USH1C-211ENST00000624811 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.09■□□□□ 0.33
USH1C-211ENST00000624811 WDR66Q8TBY9 1149 aa17.09■□□□□ 0.33
USH1C-211ENST00000624811 OTUD5Q96G74 571 aa17.09■□□□□ 0.33
USH1C-211ENST00000624811 PTPN18Q99952 460 aa17.09■□□□□ 0.33
USH1C-211ENST00000624811 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
USH1C-211ENST00000624811 CSADQ9Y600 493 aa17.09■□□□□ 0.33
USH1C-211ENST00000624811 MYH2Q9UKX2 1941 aa17.08■□□□□ 0.33
USH1C-211ENST00000624811 ADORA1P30542 326 aa17.08■□□□□ 0.32
USH1C-211ENST00000624811 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.32
USH1C-211ENST00000624811 PHKA1P46020 1223 aa17.08■□□□□ 0.32
USH1C-211ENST00000624811 OTUD7BQ6GQQ9 843 aa17.08■□□□□ 0.32
USH1C-211ENST00000624811 HHIPL2Q6UWX4 724 aa17.08■□□□□ 0.32
USH1C-211ENST00000624811 SUGT1Q9Y2Z0 365 aa17.08■□□□□ 0.32
USH1C-211ENST00000624811 TRIM17Q9Y577 477 aa17.08■□□□□ 0.32
USH1C-211ENST00000624811 PRDX5P30044 214 aa17.07■□□□□ 0.32
USH1C-211ENST00000624811 FBXO46Q6PJ61 603 aaPredicted RBP17.07■□□□□ 0.32
USH1C-211ENST00000624811 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
USH1C-211ENST00000624811 WRNIP1Q96S55 665 aa17.07■□□□□ 0.32
USH1C-211ENST00000624811 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
USH1C-211ENST00000624811 GNL3LQ9NVN8 582 aaKnown RBP17.07■□□□□ 0.32
USH1C-211ENST00000624811 FBXO3Q9UK99 471 aa17.07■□□□□ 0.32
USH1C-211ENST00000624811 HDAC5Q9UQL6 1122 aa17.07■□□□□ 0.32
USH1C-211ENST00000624811 DAGLAQ9Y4D2 1042 aa17.07■□□□□ 0.32
USH1C-211ENST00000624811 CCL15-CCL14A0A0B4J2E2 113 aa17.06■□□□□ 0.32
USH1C-211ENST00000624811 BCAR3O75815 825 aa17.06■□□□□ 0.32
USH1C-211ENST00000624811 TCP10Q12799 353 aa17.06■□□□□ 0.32
USH1C-211ENST00000624811 CCL15Q16663 113 aa17.06■□□□□ 0.32
USH1C-211ENST00000624811 INTS3Q68E01 1043 aaKnown RBP17.06■□□□□ 0.32
USH1C-211ENST00000624811 MIGA2Q7L4E1 593 aa17.06■□□□□ 0.32
USH1C-211ENST00000624811 BRI3BPQ8WY22 251 aa17.06■□□□□ 0.32
USH1C-211ENST00000624811 ZKSCAN4Q969J2 545 aaPredicted RBP17.06■□□□□ 0.32
USH1C-211ENST00000624811 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
USH1C-211ENST00000624811 TNRC18O15417 2968 aaPredicted RBP17.06■□□□□ 0.32
USH1C-211ENST00000624811 TESPA1A2RU30 521 aaPredicted RBP17.05■□□□□ 0.32
USH1C-211ENST00000624811 SRGAP3O43295 1099 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 LDHBP07195 334 aaKnown RBP17.05■□□□□ 0.32
USH1C-211ENST00000624811 TIMM10P62072 90 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
USH1C-211ENST00000624811 FAM83AQ86UY5 434 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms