RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ARID5AQ03989 594 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 WWC2Q6AWC2 1192 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 NUTM2AQ8IVF1 878 aaPredicted RBP6.4□□□□□ -1.38
ERCC6-213ENST00000624341 RASSF4Q9H2L5 321 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 STX8Q9UNK0 236 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 MSH6P52701 1360 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 STRCP1A6NGW2 1772 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 PSMA7O14818 248 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 KRT86O43790 486 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 NBPF11Q86T75 865 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 ANKRD24Q8TF21 1146 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 KAT14Q9H8E8 782 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 ANKIB1Q9P2G1 1089 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 OPA1O60313 960 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 KIAA0753Q2KHM9 967 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 TTC31Q49AM3 519 aaPredicted RBP6.4□□□□□ -1.39
ERCC6-213ENST00000624341 IFNL2Q8IZJ0 200 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 OTUD6BQ8N6M0 293 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 LINS1Q8NG48 757 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC42Q96M95 316 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 NF2P35240 595 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 UBXN1Q04323 297 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 ATP2B3Q16720 1220 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 CRACR2BQ8N4Y2 399 aaPredicted RBP6.4□□□□□ -1.39
ERCC6-213ENST00000624341 TRIM35Q9UPQ4 493 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 PLEKHG1Q9ULL1 1385 aa6.4□□□□□ -1.39
ERCC6-213ENST00000624341 PPM1FP49593 454 aaPredicted RBP6.39□□□□□ -1.39
ERCC6-213ENST00000624341 OTUD7BQ6GQQ9 843 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC129Q6ZRS4 1044 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.39□□□□□ -1.39
ERCC6-213ENST00000624341 IFT81Q8WYA0 676 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 CLSTN2Q9H4D0 955 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 NCOA5Q9HCD5 579 aaKnown RBP6.39□□□□□ -1.39
ERCC6-213ENST00000624341 ASIC1P78348 528 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 KRT83P78385 493 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 TFCP2Q12800 502 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 HDXQ7Z353 690 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 HOOK3Q86VS8 718 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 LEO1Q8WVC0 666 aaPredicted RBP6.39□□□□□ -1.39
ERCC6-213ENST00000624341 SLC4A4Q9Y6R1 1079 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 BRD1O95696 1058 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 BMP15O95972 392 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 PDE4BQ07343 736 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 GIGYF2Q6Y7W6 1299 aaKnown RBP6.39□□□□□ -1.39
ERCC6-213ENST00000624341 PPP1R9BQ96SB3 815 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 KRT23Q9C075 422 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 FAM135BQ49AJ0 1406 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 SGSM2O43147 1006 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 RPS6KB1P23443 525 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 IL15P40933 162 aaPredicted RBP6.39□□□□□ -1.39
ERCC6-213ENST00000624341 IFIT1BQ5T764 474 aaKnown RBP6.39□□□□□ -1.39
ERCC6-213ENST00000624341 FAM227BQ96M60 508 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 RABEP2Q9H5N1 569 aa6.39□□□□□ -1.39
ERCC6-213ENST00000624341 PNMA6EA0A0J9YXQ4 647 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CYP7A1P22680 504 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CCT6AP40227 531 aaKnown RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 ILDR2Q71H61 639 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 BRAPQ7Z569 592 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 TMTC2Q8N394 836 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 ESR2Q92731 530 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 LUC7L2Q9Y383 392 aaKnown RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 AKR1B15C9JRZ8 316 aaPredicted RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 SLC27A2O14975 620 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 RNF113AO15541 343 aaKnown RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 ZNF500O60304 480 aaPredicted RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 WDHD1O75717 1129 aaPredicted RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 FANCCQ00597 558 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 LRMPQ12912 555 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC122Q5T0U0 273 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CDC37L1Q7L3B6 337 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 PLIN2Q99541 437 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 ZNF652Q9Y2D9 606 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 FSD2A1L4K1 749 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 VGLL3A8MV65 326 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 UQCRFS1P1P0C7P4 283 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CTNNA2P26232 953 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 GABPB1Q06547 395 aaPredicted RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CETN1Q12798 172 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CHRNA2Q15822 529 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC155Q8N6L0 562 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CFAP65Q6ZU64 1925 aaKnown RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 RIMS2Q9UQ26 1411 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 TLDC2A0PJX2 215 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC121Q6ZUS5 278 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 FAM76AQ8TAV0 307 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 KLHDC4Q8TBB5 520 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 FBF1Q8TES7 1133 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 PAIP2Q9BPZ3 127 aaKnown RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 SMIM23A6NLE4 172 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 GSPT1P15170 499 aaKnown RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 VAV2P52735 878 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 IFI16Q16666 785 aaKnown RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 IGSF22Q8N9C0 903 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 GPT2Q8TD30 523 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 BICC1Q9H694 974 aaKnown RBP6.38□□□□□ -1.39
ERCC6-213ENST00000624341 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
ERCC6-213ENST00000624341 JAK2O60674 1132 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 HEATR3Q7Z4Q2 680 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC114Q96M63 670 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 VPS16Q9H269 839 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms