RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 SEC62Q99442 399 aaKnown RBP8.38□□□□□ -1.07
CBWD3-219ENST00000622817 TBC1D2Q9BYX2 928 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 LRP2BPQ9P2M1 347 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 PALD1Q9ULE6 856 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 CIZ1Q9ULV3 898 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-219ENST00000622817 IQSEC3Q9UPP2 1182 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-219ENST00000622817 RBM8AQ9Y5S9 174 aaKnown RBP8.38□□□□□ -1.07
CBWD3-219ENST00000622817 M0R2C6 588 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 NECTIN1Q15223 517 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
CBWD3-219ENST00000622817 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 MPNDQ8N594 471 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 TBC1D16Q8TBP0 767 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 UPF1Q92900 1129 aaKnown RBP eCLIP8.38□□□□□ -1.07
CBWD3-219ENST00000622817 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 ZNF532Q9HCE3 1301 aa8.38□□□□□ -1.07
CBWD3-219ENST00000622817 LRRC37AA6NMS7 1700 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 TCRBV5S4A2TA0A5A2 114 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 ST18O60284 1047 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 IGSF3O75054 1194 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 SLFNL1Q499Z3 407 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 CREB3L3Q68CJ9 461 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 TMED8Q6PL24 325 aaPredicted RBP8.37□□□□□ -1.07
CBWD3-219ENST00000622817 SLC51AQ86UW1 340 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 MAGEB6Q8N7X4 407 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 TDRD7Q8NHU6 1098 aaKnown RBP8.37□□□□□ -1.07
CBWD3-219ENST00000622817 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
CBWD3-219ENST00000622817 POLLQ9UGP5 575 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 SNX14Q9Y5W7 946 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 COL11A2P13942 1736 aaPredicted RBP8.37□□□□□ -1.07
CBWD3-219ENST00000622817 MYH7P12883 1935 aa8.37□□□□□ -1.07
CBWD3-219ENST00000622817 COL1A1P02452 1464 aaPredicted RBP8.36□□□□□ -1.07
CBWD3-219ENST00000622817 SLC27A2O14975 620 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 POLD1P28340 1107 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 CHRNA5P30532 468 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 SLC4A3P48751 1232 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 SPTY2D1Q68D10 685 aaPredicted RBP8.36□□□□□ -1.07
CBWD3-219ENST00000622817 DPP8Q6V1X1 898 aaPredicted RBP8.36□□□□□ -1.07
CBWD3-219ENST00000622817 WDR66Q8TBY9 1149 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 TM6SF1Q9BZW5 370 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 MTFR1LQ9H019 292 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 PUS7LQ9H0K6 701 aaKnown RBP8.36□□□□□ -1.07
CBWD3-219ENST00000622817 RAI14Q9P0K7 980 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 ABCF2Q9UG63 623 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 CTNNA3Q9UI47 895 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 GPAA1O43292 621 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 ZBTB7AO95365 584 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 HSPD1P10809 573 aaKnown RBP8.36□□□□□ -1.07
CBWD3-219ENST00000622817 IL1R1P14778 569 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 PSMA5P28066 241 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 MCM2P49736 904 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 NEK4P51957 841 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 CHAF1AQ13111 956 aaPredicted RBP8.36□□□□□ -1.07
CBWD3-219ENST00000622817 TSGA10IPQ3SY00 556 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 CC2D2BQ6DHV5 1058 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 ZGPATQ8N5A5 531 aaKnown RBP8.36□□□□□ -1.07
CBWD3-219ENST00000622817 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 CD209Q9NNX6 404 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 DOCK2Q92608 1830 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 SALL1Q9NSC2 1324 aa8.36□□□□□ -1.07
CBWD3-219ENST00000622817 KRT32Q14532 448 aa8.35□□□□□ -1.07
CBWD3-219ENST00000622817 GRIPAP1Q4V328 841 aa8.35□□□□□ -1.07
CBWD3-219ENST00000622817 VPS53Q5VIR6 699 aa8.35□□□□□ -1.07
CBWD3-219ENST00000622817 ERICH6Q7L0X2 663 aa8.35□□□□□ -1.07
CBWD3-219ENST00000622817 GPR101Q96P66 508 aaPredicted RBP8.35□□□□□ -1.07
CBWD3-219ENST00000622817 EYA3Q99504 573 aa8.35□□□□□ -1.07
CBWD3-219ENST00000622817 ZC3H12CQ9C0D7 883 aaKnown RBP8.35□□□□□ -1.07
CBWD3-219ENST00000622817 COA1Q9GZY4 146 aa8.35□□□□□ -1.07
CBWD3-219ENST00000622817 PLSCR2Q9NRY7 297 aa8.35□□□□□ -1.07
CBWD3-219ENST00000622817 LTBP1Q14766 1721 aa8.35□□□□□ -1.07
CBWD3-219ENST00000622817 K7ELQ4 463 aaPredicted RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 GNAT2P19087 354 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 CYP7A1P22680 504 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 IRX5P78411 483 aaPredicted RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 R3HDM1Q15032 1099 aaKnown RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 NAA16Q6N069 864 aaPredicted RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 TTLL6Q8N841 843 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 JAKMIP1Q96N16 626 aaKnown RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 STRBPQ96SI9 672 aaKnown RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 MYO5AQ9Y4I1 1855 aaKnown RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 MBD4O95243 580 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 CD2BP2O95400 341 aaKnown RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 CASTP20810 708 aaKnown RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 OLFM4Q6UX06 510 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 TBC1D22AQ8WUA7 517 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 C7orf43Q8WVR3 580 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 NSUN4Q96CB9 384 aaKnown RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 UPF3BQ9BZI7 483 aaKnown RBP8.34□□□□□ -1.07
CBWD3-219ENST00000622817 ZSWIM6Q9HCJ5 1215 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 CYP46A1Q9Y6A2 500 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 MYH13Q9UKX3 1938 aa8.34□□□□□ -1.07
CBWD3-219ENST00000622817 MAGEB6P1A0A0J9YX57 407 aa8.33□□□□□ -1.08
CBWD3-219ENST00000622817 PATL2C9JE40 543 aaKnown RBP8.33□□□□□ -1.08
CBWD3-219ENST00000622817 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
CBWD3-219ENST00000622817 FOXP2O15409 715 aa8.33□□□□□ -1.08
CBWD3-219ENST00000622817 LDHBP07195 334 aaKnown RBP8.33□□□□□ -1.08
CBWD3-219ENST00000622817 CYP21A2P08686 494 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms