RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PPFIA3O75145 1194 aa14.39□□□□□ -0.11
LITAF-221ENST00000622633 PTGS1P23219 599 aa14.39□□□□□ -0.11
LITAF-221ENST00000622633 APOBRQ0VD83 1088 aa14.39□□□□□ -0.11
LITAF-221ENST00000622633 UBXN6Q9BZV1 441 aa14.39□□□□□ -0.11
LITAF-221ENST00000622633 PAG1Q9NWQ8 432 aa14.39□□□□□ -0.11
LITAF-221ENST00000622633 RFX7Q2KHR2 1363 aa14.38□□□□□ -0.11
LITAF-221ENST00000622633 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
LITAF-221ENST00000622633 DHX32Q7L7V1 743 aaKnown RBP14.38□□□□□ -0.11
LITAF-221ENST00000622633 TBC1D22AQ8WUA7 517 aa14.38□□□□□ -0.11
LITAF-221ENST00000622633 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
LITAF-221ENST00000622633 PFKFB2O60825 505 aa14.38□□□□□ -0.11
LITAF-221ENST00000622633 ATF3P18847 181 aa14.38□□□□□ -0.11
LITAF-221ENST00000622633 CALRP27797 417 aaKnown RBP14.38□□□□□ -0.11
LITAF-221ENST00000622633 CLCN6P51797 869 aa14.38□□□□□ -0.11
LITAF-221ENST00000622633 CCT2P78371 535 aaKnown RBP14.38□□□□□ -0.11
LITAF-221ENST00000622633 RBM43Q6ZSC3 357 aaKnown RBP14.38□□□□□ -0.11
LITAF-221ENST00000622633 ZNF526Q8TF50 670 aaPredicted RBP14.38□□□□□ -0.11
LITAF-221ENST00000622633 PPM1EQ8WY54 764 aa14.38□□□□□ -0.11
LITAF-221ENST00000622633 ZNF594Q96JF6 807 aaPredicted RBP14.38□□□□□ -0.11
LITAF-221ENST00000622633 SH3TC1Q8TE82 1336 aa14.38□□□□□ -0.11
LITAF-221ENST00000622633 CTDNEP1O95476 244 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 SCP2P22307 547 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 ARID4AP29374 1257 aaPredicted RBP14.37□□□□□ -0.11
LITAF-221ENST00000622633 LRRC24Q50LG9 513 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 ZNF513Q8N8E2 541 aaPredicted RBP14.37□□□□□ -0.11
LITAF-221ENST00000622633 NSUN7Q8NE18 718 aaKnown RBP14.37□□□□□ -0.11
LITAF-221ENST00000622633 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 FTOQ9C0B1 505 aaKnown RBP eCLIP14.37□□□□□ -0.11
LITAF-221ENST00000622633 DNAJC25Q9H1X3 360 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 ZSCAN16Q9H4T2 348 aaPredicted RBP14.37□□□□□ -0.11
LITAF-221ENST00000622633 PRDM16Q9HAZ2 1276 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 ZCCHC17Q9NP64 241 aaKnown RBP14.37□□□□□ -0.11
LITAF-221ENST00000622633 ZNF142P52746 1687 aaPredicted RBP14.37□□□□□ -0.11
LITAF-221ENST00000622633 ZRANB2O95218 330 aaKnown RBP eCLIP14.37□□□□□ -0.11
LITAF-221ENST00000622633 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 DRC7Q8IY82 874 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
LITAF-221ENST00000622633 HELLSQ9NRZ9 838 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 CWC25Q9NXE8 425 aaPredicted RBP14.37□□□□□ -0.11
LITAF-221ENST00000622633 NRBP1Q9UHY1 535 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 CFAP45Q9UL16 551 aa14.37□□□□□ -0.11
LITAF-221ENST00000622633 CPP00450 1065 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 A1BGP04217 495 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 ADD1P35611 737 aaKnown RBP14.36□□□□□ -0.11
LITAF-221ENST00000622633 ZNF165P49910 485 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 CHST3Q7LGC8 479 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 CCDC186Q7Z3E2 898 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 TRIM5Q9C035 493 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 MST1RQ04912 1400 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 HMGB1P09429 215 aaKnown RBP14.36□□□□□ -0.11
LITAF-221ENST00000622633 EXOSC10Q01780 885 aaKnown RBP14.36□□□□□ -0.11
LITAF-221ENST00000622633 LRMPQ12912 555 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 ZMYM1Q5SVZ6 1142 aa14.36□□□□□ -0.11
LITAF-221ENST00000622633 LLPHQ9BRT6 129 aaKnown RBP14.36□□□□□ -0.11
LITAF-221ENST00000622633 H0YHG0 523 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 HSPD1P10809 573 aaKnown RBP14.35□□□□□ -0.11
LITAF-221ENST00000622633 ZNF75DP51815 510 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 SARNPP82979 210 aaKnown RBP14.35□□□□□ -0.11
LITAF-221ENST00000622633 FAXDC2Q96IV6 333 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 ZBTB3Q9H5J0 574 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 ANKRD33BA6NCL7 494 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 E7EWF7 191 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 ACTN2P35609 894 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
LITAF-221ENST00000622633 GUCY1B3Q02153 619 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 TTLL5Q6EMB2 1281 aa14.35□□□□□ -0.11
LITAF-221ENST00000622633 TDRD7Q8NHU6 1098 aaKnown RBP14.35□□□□□ -0.11
LITAF-221ENST00000622633 PUS3Q9BZE2 481 aaKnown RBP14.35□□□□□ -0.11
LITAF-221ENST00000622633 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
LITAF-221ENST00000622633 NPHP1O15259 732 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 IFIT1P09914 478 aaKnown RBP14.34□□□□□ -0.11
LITAF-221ENST00000622633 TTC19Q6DKK2 380 aaPredicted RBP14.34□□□□□ -0.11
LITAF-221ENST00000622633 NAA16Q6N069 864 aaPredicted RBP14.34□□□□□ -0.11
LITAF-221ENST00000622633 CCAR1Q8IX12 1150 aaKnown RBP14.34□□□□□ -0.11
LITAF-221ENST00000622633 PSMD1Q99460 953 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 PALLDQ8WX93 1383 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 EYA2O00167 538 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 RNF113AO15541 343 aaKnown RBP14.34□□□□□ -0.11
LITAF-221ENST00000622633 CORO7P57737 925 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 PLA2G4DQ86XP0 818 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 PSD3Q9NYI0 1048 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 RCOR1Q9UKL0 485 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 ALS2Q96Q42 1657 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 MAST3O60307 1309 aa14.34□□□□□ -0.11
LITAF-221ENST00000622633 M0R2C6 588 aa14.33□□□□□ -0.12
LITAF-221ENST00000622633 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
LITAF-221ENST00000622633 USP28Q96RU2 1077 aa14.33□□□□□ -0.12
LITAF-221ENST00000622633 GOLPH3LQ9H4A5 285 aa14.33□□□□□ -0.12
LITAF-221ENST00000622633 RPS6KL1Q9Y6S9 549 aa14.33□□□□□ -0.12
LITAF-221ENST00000622633 SLU7O95391 586 aaKnown RBP14.33□□□□□ -0.12
LITAF-221ENST00000622633 PDIA3P30101 505 aaKnown RBP14.33□□□□□ -0.12
LITAF-221ENST00000622633 GPHNQ9NQX3 736 aaPredicted RBP14.33□□□□□ -0.12
LITAF-221ENST00000622633 KIF1AQ12756 1690 aa14.32□□□□□ -0.12
LITAF-221ENST00000622633 OAS2P29728 719 aaKnown RBP14.32□□□□□ -0.12
LITAF-221ENST00000622633 RBM5P52756 815 aaKnown RBP eCLIP14.32□□□□□ -0.12
LITAF-221ENST00000622633 FKBP4Q02790 459 aaKnown RBP eCLIP14.32□□□□□ -0.12
LITAF-221ENST00000622633 ERCC6LQ2NKX8 1250 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms