RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 FBXO46Q6PJ61 603 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-227ENST00000622057 FBXO33Q7Z6M2 555 aa11.71□□□□□ -0.53
TARDBP-227ENST00000622057 ANKRD44Q8N8A2 993 aa11.71□□□□□ -0.53
TARDBP-227ENST00000622057 SSH1Q8WYL5 1049 aa11.71□□□□□ -0.53
TARDBP-227ENST00000622057 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
TARDBP-227ENST00000622057 PTPRCP08575 1304 aa11.7□□□□□ -0.54
TARDBP-227ENST00000622057 E9PSI1 815 aa11.7□□□□□ -0.54
TARDBP-227ENST00000622057 GJA5P36382 358 aa11.7□□□□□ -0.54
TARDBP-227ENST00000622057 TMEM39BQ9GZU3 492 aa11.7□□□□□ -0.54
TARDBP-227ENST00000622057 USP44Q9H0E7 712 aa11.7□□□□□ -0.54
TARDBP-227ENST00000622057 TRIM17Q9Y577 477 aa11.7□□□□□ -0.54
TARDBP-227ENST00000622057 SSC5DA1L4H1 1573 aa11.7□□□□□ -0.54
TARDBP-227ENST00000622057 CACNB3P54284 484 aa11.69□□□□□ -0.54
TARDBP-227ENST00000622057 MAP3K9P80192 1104 aa11.69□□□□□ -0.54
TARDBP-227ENST00000622057 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
TARDBP-227ENST00000622057 TBC1D22AQ8WUA7 517 aa11.69□□□□□ -0.54
TARDBP-227ENST00000622057 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
TARDBP-227ENST00000622057 PTPN18Q99952 460 aa11.69□□□□□ -0.54
TARDBP-227ENST00000622057 IFIT1P09914 478 aaKnown RBP11.68□□□□□ -0.54
TARDBP-227ENST00000622057 SLFN5Q08AF3 891 aa11.68□□□□□ -0.54
TARDBP-227ENST00000622057 VGLL2Q8N8G2 317 aa11.68□□□□□ -0.54
TARDBP-227ENST00000622057 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
TARDBP-227ENST00000622057 TEKT1Q969V4 418 aa11.68□□□□□ -0.54
TARDBP-227ENST00000622057 CDCA7LQ96GN5 454 aa11.68□□□□□ -0.54
TARDBP-227ENST00000622057 TEPSINQ96N21 525 aa11.68□□□□□ -0.54
TARDBP-227ENST00000622057 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
TARDBP-227ENST00000622057 SLC34A2O95436 690 aa11.67□□□□□ -0.54
TARDBP-227ENST00000622057 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
TARDBP-227ENST00000622057 CRHR2Q13324 411 aa11.67□□□□□ -0.54
TARDBP-227ENST00000622057 PUM3Q15397 648 aaKnown RBP11.67□□□□□ -0.54
TARDBP-227ENST00000622057 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
TARDBP-227ENST00000622057 OTOP1Q7RTM1 612 aa11.67□□□□□ -0.54
TARDBP-227ENST00000622057 CD99L2Q8TCZ2 262 aa11.67□□□□□ -0.54
TARDBP-227ENST00000622057 ERO1AQ96HE7 468 aa11.67□□□□□ -0.54
TARDBP-227ENST00000622057 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
TARDBP-227ENST00000622057 CSADQ9Y600 493 aa11.67□□□□□ -0.54
TARDBP-227ENST00000622057 EYA2O00167 538 aa11.66□□□□□ -0.54
TARDBP-227ENST00000622057 FGFR2P21802 821 aa11.66□□□□□ -0.54
TARDBP-227ENST00000622057 SP3Q02447 781 aa11.66□□□□□ -0.54
TARDBP-227ENST00000622057 VGLL4Q14135 290 aa11.66□□□□□ -0.54
TARDBP-227ENST00000622057 ALDH1L2Q3SY69 923 aa11.66□□□□□ -0.54
TARDBP-227ENST00000622057 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
TARDBP-227ENST00000622057 MRIQ9BWK5 157 aa11.66□□□□□ -0.54
TARDBP-227ENST00000622057 TMOD2Q9NZR1 351 aa11.66□□□□□ -0.54
TARDBP-227ENST00000622057 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 SLC5A1P13866 664 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-227ENST00000622057 GTF2A2P52657 109 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 CCL15Q16663 113 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 APOBEC3HQ6NTF7 200 aaKnown RBP11.65□□□□□ -0.54
TARDBP-227ENST00000622057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.65□□□□□ -0.54
TARDBP-227ENST00000622057 LPIN2Q92539 896 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 ZDHHC15Q96MV8 337 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 SIL1Q9H173 461 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 EFCC1Q9HA90 598 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 NOB1Q9ULX3 412 aaKnown RBP11.65□□□□□ -0.54
TARDBP-227ENST00000622057 PTPN22Q9Y2R2 807 aa11.65□□□□□ -0.54
TARDBP-227ENST00000622057 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
TARDBP-227ENST00000622057 UBTFL1P0CB47 393 aaPredicted RBP11.64□□□□□ -0.55
TARDBP-227ENST00000622057 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
TARDBP-227ENST00000622057 MIGA2Q7L4E1 593 aa11.64□□□□□ -0.55
TARDBP-227ENST00000622057 WDR66Q8TBY9 1149 aa11.64□□□□□ -0.55
TARDBP-227ENST00000622057 BRI3BPQ8WY22 251 aa11.64□□□□□ -0.55
TARDBP-227ENST00000622057 ZKSCAN4Q969J2 545 aaPredicted RBP11.64□□□□□ -0.55
TARDBP-227ENST00000622057 WRNIP1Q96S55 665 aa11.64□□□□□ -0.55
TARDBP-227ENST00000622057 ZFYVE28Q9HCC9 887 aa11.64□□□□□ -0.55
TARDBP-227ENST00000622057 SUGT1Q9Y2Z0 365 aa11.64□□□□□ -0.55
TARDBP-227ENST00000622057 MAST3O60307 1309 aa11.63□□□□□ -0.55
TARDBP-227ENST00000622057 INTS3Q68E01 1043 aaKnown RBP11.63□□□□□ -0.55
TARDBP-227ENST00000622057 HHIPL2Q6UWX4 724 aa11.63□□□□□ -0.55
TARDBP-227ENST00000622057 ATG9AQ7Z3C6 839 aa11.63□□□□□ -0.55
TARDBP-227ENST00000622057 FAM83AQ86UY5 434 aa11.63□□□□□ -0.55
TARDBP-227ENST00000622057 FAM43AQ8N2R8 423 aa11.63□□□□□ -0.55
TARDBP-227ENST00000622057 HOOK2Q96ED9 719 aa11.63□□□□□ -0.55
TARDBP-227ENST00000622057 CEP126Q9P2H0 1117 aa11.63□□□□□ -0.55
TARDBP-227ENST00000622057 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 POTEFA5A3E0 1075 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
TARDBP-227ENST00000622057 CAP1Q01518 475 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 TCP10Q12799 353 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 ARHGEF6Q15052 776 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 ATP2B3Q16720 1220 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 PRPF38BQ5VTL8 546 aaKnown RBP11.62□□□□□ -0.55
TARDBP-227ENST00000622057 DCAF15Q66K64 600 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 ERO1BQ86YB8 467 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 GNL3LQ9NVN8 582 aaKnown RBP11.62□□□□□ -0.55
TARDBP-227ENST00000622057 SNCAIPQ9Y6H5 919 aa11.62□□□□□ -0.55
TARDBP-227ENST00000622057 ECM29Q5VYK3 1845 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 IRF6O14896 467 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 ECM2O94769 699 aaPredicted RBP11.61□□□□□ -0.55
TARDBP-227ENST00000622057 CETPP11597 493 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 PRDX5P30044 214 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 DIXDC1Q155Q3 683 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 FKBP1CQ5VVH2 108 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 TRMT2AQ8IZ69 625 aaKnown RBP11.61□□□□□ -0.55
TARDBP-227ENST00000622057 FAM151AQ8WW52 585 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 ZNF341Q9BYN7 854 aa11.61□□□□□ -0.55
TARDBP-227ENST00000622057 API5Q9BZZ5 524 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms